| Chain sequence(s) |
H: EVQLVESGGGVVQPGGSLKLSCVASGTDFSINFIRWYRQAPGKQREFVAGFTATGNTNYADSMKGRFTISRDNTKNAVYLQIDSLKPEDTAVYYCYMLDKWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.2964 | |
| 2 | V | H | -1.8910 | |
| 3 | Q | H | -1.4165 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.3011 | |
| 6 | E | H | 0.2933 | |
| 7 | S | H | -0.5455 | |
| 8 | G | H | -1.1622 | |
| 9 | G | H | -0.7697 | |
| 10 | G | H | 0.2624 | |
| 11 | V | H | 1.2826 | |
| 12 | V | H | 0.1379 | |
| 13 | Q | H | -1.2249 | |
| 14 | P | H | -1.4612 | |
| 15 | G | H | -1.3582 | |
| 16 | G | H | -0.8749 | |
| 17 | S | H | -1.2791 | |
| 18 | L | H | -0.8976 | |
| 19 | K | H | -1.9573 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.1955 | |
| 22 | C | H | 0.0000 | |
| 23 | V | H | 0.2081 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.2281 | |
| 26 | G | H | -1.7719 | |
| 27 | T | H | -1.3683 | |
| 28 | D | H | -1.5817 | |
| 29 | F | H | 0.0000 | |
| 30 | S | H | -0.0207 | |
| 31 | I | H | 1.8209 | |
| 32 | N | H | 0.0000 | |
| 33 | F | H | 2.3815 | |
| 34 | I | H | 0.0000 | |
| 35 | R | H | -0.2046 | |
| 36 | W | H | 0.0000 | |
| 37 | Y | H | -0.6434 | |
| 38 | R | H | -1.2466 | |
| 39 | Q | H | -2.0229 | |
| 40 | A | H | -1.8645 | |
| 41 | P | H | -1.3543 | |
| 42 | G | H | -1.8469 | |
| 43 | K | H | -3.0997 | |
| 44 | Q | H | -3.0215 | |
| 45 | R | H | -2.6492 | |
| 46 | E | H | -1.9630 | |
| 47 | F | H | -0.7084 | |
| 48 | V | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | G | H | 0.0000 | |
| 51 | F | H | -0.3540 | |
| 52 | T | H | -0.4349 | |
| 53 | A | H | 0.2785 | |
| 54 | T | H | -0.6134 | |
| 55 | G | H | -0.6743 | |
| 56 | N | H | -1.6631 | |
| 57 | T | H | -1.0778 | |
| 58 | N | H | -1.5751 | |
| 59 | Y | H | -1.2655 | |
| 60 | A | H | -1.4285 | |
| 61 | D | H | -2.5197 | |
| 62 | S | H | -1.6452 | |
| 63 | M | H | 0.0000 | |
| 64 | K | H | -2.7110 | |
| 65 | G | H | -1.8553 | |
| 66 | R | H | -1.5524 | |
| 67 | F | H | 0.0000 | |
| 68 | T | H | -0.9898 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.6364 | |
| 71 | R | H | -1.4662 | |
| 72 | D | H | -2.2293 | |
| 73 | N | H | -2.5953 | |
| 74 | T | H | -1.9017 | |
| 75 | K | H | -2.5101 | |
| 76 | N | H | -2.0686 | |
| 77 | A | H | 0.0000 | |
| 78 | V | H | 0.0000 | |
| 79 | Y | H | -0.5692 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -1.1826 | |
| 82 | I | H | 0.0000 | |
| 83 | D | H | -1.6846 | |
| 84 | S | H | -1.3258 | |
| 85 | L | H | 0.0000 | |
| 86 | K | H | -2.0401 | |
| 87 | P | H | -1.7698 | |
| 88 | E | H | -2.2003 | |
| 89 | D | H | 0.0000 | |
| 90 | T | H | -0.8679 | |
| 91 | A | H | 0.0000 | |
| 92 | V | H | -0.7183 | |
| 93 | Y | H | 0.0000 | |
| 94 | Y | H | -0.3435 | |
| 95 | C | H | 0.0000 | |
| 96 | Y | H | -0.2431 | |
| 97 | M | H | 0.0000 | |
| 98 | L | H | 0.2942 | |
| 99 | D | H | -1.4921 | |
| 100 | K | H | -1.5215 | |
| 101 | W | H | -0.4674 | |
| 102 | G | H | -0.1601 | |
| 103 | Q | H | -1.0428 | |
| 104 | G | H | -0.5474 | |
| 105 | T | H | 0.0000 | |
| 106 | Q | H | -1.1999 | |
| 107 | V | H | 0.0000 | |
| 108 | T | H | -0.2069 | |
| 109 | V | H | 0.0000 | |
| 110 | S | H | -0.7855 | |
| 111 | S | H | -0.8533 |