| Chain sequence(s) |
F: VEEEAYVVVLKSGGKTAAASYRVTSSGEVEEVASAAGDQAEVEAVLATFASLPPSAITLTTVEVPEDISLEKMLELAKGRAKNYIKAKNY
input PDB |
| Selected Chain(s) | F |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with F chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:15)
[INFO] Main: Simulation completed successfully. (00:01:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | F | 1.4567 | |
| 2 | E | F | -1.8155 | |
| 3 | E | F | -2.4438 | |
| 4 | E | F | -2.1402 | |
| 5 | A | F | 0.0000 | |
| 6 | Y | F | 0.0000 | |
| 7 | V | F | 0.0000 | |
| 8 | V | F | 0.0000 | |
| 9 | V | F | 0.0000 | |
| 10 | L | F | 0.0000 | |
| 11 | K | F | -1.1507 | |
| 12 | S | F | 0.0000 | |
| 13 | G | F | -0.5449 | |
| 14 | G | F | -0.7390 | |
| 15 | K | F | -1.1800 | |
| 16 | T | F | 0.0000 | |
| 17 | A | F | 0.0000 | |
| 18 | A | F | 0.0000 | |
| 19 | A | F | 0.0000 | |
| 20 | S | F | 0.0000 | |
| 21 | Y | F | 0.0000 | |
| 22 | R | F | -0.5419 | |
| 23 | V | F | 0.1255 | |
| 24 | T | F | -0.0228 | |
| 25 | S | F | -0.2536 | |
| 26 | S | F | -0.3383 | |
| 27 | G | F | -0.8225 | |
| 28 | E | F | -1.8227 | |
| 29 | V | F | -0.1003 | |
| 30 | E | F | -1.4492 | |
| 31 | E | F | -1.9543 | |
| 32 | V | F | 0.1531 | |
| 33 | A | F | 0.0779 | |
| 34 | S | F | -0.0985 | |
| 35 | A | F | -0.0091 | |
| 36 | A | F | 0.0076 | |
| 37 | G | F | -0.3890 | |
| 38 | D | F | -2.0126 | |
| 39 | Q | F | -1.5033 | |
| 40 | A | F | -0.4834 | |
| 41 | E | F | -1.8093 | |
| 42 | V | F | 0.0000 | |
| 43 | E | F | -1.8108 | |
| 44 | A | F | -0.2779 | |
| 45 | V | F | 0.0000 | |
| 46 | L | F | 0.4292 | |
| 47 | A | F | 0.1298 | |
| 48 | T | F | -0.0436 | |
| 49 | F | F | 0.0000 | |
| 50 | A | F | 0.0204 | |
| 51 | S | F | -0.1655 | |
| 52 | L | F | 0.1309 | |
| 53 | P | F | -0.2472 | |
| 54 | P | F | -0.3351 | |
| 55 | S | F | -0.2584 | |
| 56 | A | F | 0.0000 | |
| 57 | I | F | 0.3503 | |
| 58 | T | F | 0.2494 | |
| 59 | L | F | 1.1951 | |
| 60 | T | F | 0.1887 | |
| 61 | T | F | 0.0151 | |
| 62 | V | F | 0.0876 | |
| 63 | E | F | -1.8080 | |
| 64 | V | F | -0.1841 | |
| 65 | P | F | -0.5418 | |
| 66 | E | F | -2.1894 | |
| 67 | D | F | -2.0747 | |
| 68 | I | F | -0.0757 | |
| 69 | S | F | -0.0579 | |
| 70 | L | F | -0.0683 | |
| 71 | E | F | -2.0070 | |
| 72 | K | F | -1.5937 | |
| 73 | M | F | 0.0000 | |
| 74 | L | F | 0.0091 | |
| 75 | E | F | -1.7130 | |
| 76 | L | F | -0.1067 | |
| 77 | A | F | 0.0000 | |
| 78 | K | F | -0.5823 | |
| 79 | G | F | -0.4573 | |
| 80 | R | F | -1.0483 | |
| 81 | A | F | 0.0000 | |
| 82 | K | F | -1.1216 | |
| 83 | N | F | -1.2952 | |
| 84 | Y | F | 0.1743 | |
| 85 | I | F | 0.0000 | |
| 86 | K | F | -1.0097 | |
| 87 | A | F | -0.4324 | |
| 88 | K | F | -1.9095 | |
| 89 | N | F | -1.3387 | |
| 90 | Y | F | 1.0944 |