Project name: Design51_1_7

Status: done

Started: 2026-07-22 17:23:25
Settings
Chain sequence(s) F: VEEEAYVVVLKSGGKTAAASYRVTSSGEVEEVASAAGDQAEVEAVLATFASLPPSAITLTTVEVPEDISLEKMLELAKGRAKNYIKAKNY
input PDB
Selected Chain(s) F
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with F chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:15)
Show buried residues

Minimal score value
-2.4438
Maximal score value
1.4567
Average score
-0.472
Total score value
-42.4836

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V F 1.4567
2 E F -1.8155
3 E F -2.4438
4 E F -2.1402
5 A F 0.0000
6 Y F 0.0000
7 V F 0.0000
8 V F 0.0000
9 V F 0.0000
10 L F 0.0000
11 K F -1.1507
12 S F 0.0000
13 G F -0.5449
14 G F -0.7390
15 K F -1.1800
16 T F 0.0000
17 A F 0.0000
18 A F 0.0000
19 A F 0.0000
20 S F 0.0000
21 Y F 0.0000
22 R F -0.5419
23 V F 0.1255
24 T F -0.0228
25 S F -0.2536
26 S F -0.3383
27 G F -0.8225
28 E F -1.8227
29 V F -0.1003
30 E F -1.4492
31 E F -1.9543
32 V F 0.1531
33 A F 0.0779
34 S F -0.0985
35 A F -0.0091
36 A F 0.0076
37 G F -0.3890
38 D F -2.0126
39 Q F -1.5033
40 A F -0.4834
41 E F -1.8093
42 V F 0.0000
43 E F -1.8108
44 A F -0.2779
45 V F 0.0000
46 L F 0.4292
47 A F 0.1298
48 T F -0.0436
49 F F 0.0000
50 A F 0.0204
51 S F -0.1655
52 L F 0.1309
53 P F -0.2472
54 P F -0.3351
55 S F -0.2584
56 A F 0.0000
57 I F 0.3503
58 T F 0.2494
59 L F 1.1951
60 T F 0.1887
61 T F 0.0151
62 V F 0.0876
63 E F -1.8080
64 V F -0.1841
65 P F -0.5418
66 E F -2.1894
67 D F -2.0747
68 I F -0.0757
69 S F -0.0579
70 L F -0.0683
71 E F -2.0070
72 K F -1.5937
73 M F 0.0000
74 L F 0.0091
75 E F -1.7130
76 L F -0.1067
77 A F 0.0000
78 K F -0.5823
79 G F -0.4573
80 R F -1.0483
81 A F 0.0000
82 K F -1.1216
83 N F -1.2952
84 Y F 0.1743
85 I F 0.0000
86 K F -1.0097
87 A F -0.4324
88 K F -1.9095
89 N F -1.3387
90 Y F 1.0944
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Laboratory of Theory of Biopolymers 2018