Project name: query_structure

Status: done

Started: 2026-03-17 00:47:12
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Chain sequence(s) A: QVQLVESGGGLVQAGGSLRLSCAASGFPVYHRSMLWYRQAPGKEREWVAAIKSNGAGTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCTVGVGTNYWGQGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:03)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:03)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:03)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:03)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:14)
Show buried residues

Minimal score value
-3.5681
Maximal score value
1.3366
Average score
-0.8485
Total score value
-96.7309

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.3750
2 V A -0.5926
3 Q A -0.7873
4 L A 0.0000
5 V A 0.4270
6 E A 0.0000
7 S A -0.7487
8 G A -1.0536
9 G A -0.8503
10 G A -0.0821
11 L A 1.0045
12 V A -0.0235
13 Q A -1.2364
14 A A -1.3959
15 G A -1.3146
16 G A -0.8711
17 S A -1.2866
18 L A -1.0154
19 R A -2.2826
20 L A 0.0000
21 S A -0.5571
22 C A 0.0000
23 A A -0.3290
24 A A 0.0000
25 S A -0.6883
26 G A -0.9014
27 F A -0.5743
28 P A -0.8837
29 V A 0.0000
30 Y A -1.2073
31 H A -1.9068
32 R A -2.3151
33 S A -1.4135
34 M A 0.0000
35 L A 0.0000
36 W A 0.0000
37 Y A -0.3832
38 R A -1.2525
39 Q A -2.1384
40 A A -2.0629
41 P A -1.4641
42 G A -1.9763
43 K A -3.3782
44 E A -3.5681
45 R A -2.7762
46 E A -1.7708
47 W A -0.5594
48 V A 0.0000
49 A A 0.0000
50 A A 0.0000
51 I A 0.0000
52 K A -2.1003
53 S A -2.2033
54 N A -2.1598
55 G A -1.7063
56 A A -0.8279
57 G A -0.6695
58 T A -0.0636
59 W A 0.1272
60 Y A -0.5253
61 A A -1.1764
62 D A -2.3363
63 S A -1.7646
64 V A 0.0000
65 K A -2.5281
66 G A -1.7809
67 R A -1.5303
68 F A 0.0000
69 T A -0.8887
70 I A 0.0000
71 S A -0.7588
72 R A -1.3820
73 D A -1.8416
74 N A -2.3351
75 A A -1.6178
76 K A -2.4513
77 N A -1.6486
78 T A 0.0000
79 V A 0.0000
80 Y A -0.7685
81 L A 0.0000
82 Q A -1.5899
83 M A 0.0000
84 N A -1.4553
85 S A -1.1886
86 L A 0.0000
87 K A -2.2788
88 P A -1.9008
89 E A -2.3296
90 D A 0.0000
91 T A -0.9946
92 A A 0.0000
93 V A -0.7153
94 Y A 0.0000
95 Y A -0.2586
96 C A 0.0000
97 T A 0.0000
98 V A 0.0000
99 G A 0.0024
100 V A 1.3366
101 G A 0.1436
102 T A -0.1242
103 N A -0.7501
104 Y A -0.0448
105 W A 0.1583
106 G A -0.2318
107 Q A -1.0307
108 G A -0.6456
109 T A 0.0000
110 Q A -1.2282
111 V A 0.0000
112 T A -0.3271
113 V A 0.0000
114 S A -0.7492
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Laboratory of Theory of Biopolymers 2018