| Chain sequence(s) |
H: QVQLVQSGAEVAKPGTSVKLSCKASGYTFTDYWMQWVKQRPGQGLEWIGTIYPGDGDTGYAQKFQGKATLTADKSSKTVYMHLSSLASEDSAVYYCARGDYYGSNSLDYWGQGTSVTVSS
L: DIVMTQSHLSMSTSLGDPVSITCKASQDVSTVVAWYQQKPGQSPRRLIYSASYRYIGVPDRFTGSGAGTDFTFTISSVQAEDLAVYYCQQHYSPPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:14)
[INFO] Main: Simulation completed successfully. (00:01:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5367 | |
| 2 | V | H | -1.0260 | |
| 3 | Q | H | -1.2133 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7193 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.4049 | |
| 8 | G | H | -0.3309 | |
| 9 | A | H | 0.0352 | |
| 11 | E | H | 0.3035 | |
| 12 | V | H | 1.2444 | |
| 13 | A | H | -0.1334 | |
| 14 | K | H | -1.5445 | |
| 15 | P | H | -1.5379 | |
| 16 | G | H | -1.1367 | |
| 17 | T | H | -0.8937 | |
| 18 | S | H | -0.8716 | |
| 19 | V | H | -0.5692 | |
| 20 | K | H | -1.2869 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2924 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.0077 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0418 | |
| 27 | G | H | -1.0954 | |
| 28 | Y | H | -0.6018 | |
| 29 | T | H | -0.3734 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.0258 | |
| 36 | D | H | -0.3588 | |
| 37 | Y | H | 0.0000 | |
| 38 | W | H | 0.1187 | |
| 39 | M | H | 0.0000 | |
| 40 | Q | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -1.0262 | |
| 45 | R | H | -1.6165 | |
| 46 | P | H | -1.0994 | |
| 47 | G | H | -1.3697 | |
| 48 | Q | H | -1.9692 | |
| 49 | G | H | -1.3363 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.4603 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | T | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.9357 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -1.6890 | |
| 62 | D | H | -2.6468 | |
| 63 | G | H | -2.1370 | |
| 64 | D | H | -2.3667 | |
| 65 | T | H | -1.0561 | |
| 66 | G | H | -0.6948 | |
| 67 | Y | H | -0.8477 | |
| 68 | A | H | 0.0000 | |
| 69 | Q | H | -2.7167 | |
| 70 | K | H | -2.7592 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -2.2779 | |
| 74 | G | H | -1.5833 | |
| 75 | K | H | -1.3965 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.6152 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.5668 | |
| 80 | A | H | -1.1814 | |
| 81 | D | H | -1.4202 | |
| 82 | K | H | -1.9563 | |
| 83 | S | H | -1.1265 | |
| 84 | S | H | -1.2084 | |
| 85 | K | H | -1.6850 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.2976 | |
| 89 | M | H | 0.0000 | |
| 90 | H | H | -0.9090 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7218 | |
| 93 | S | H | -0.8016 | |
| 94 | L | H | 0.0000 | |
| 95 | A | H | -1.2333 | |
| 96 | S | H | -1.3897 | |
| 97 | E | H | -2.0017 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6426 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.1542 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0517 | |
| 107 | G | H | 0.0000 | |
| 108 | D | H | 0.6145 | |
| 109 | Y | H | 1.5616 | |
| 110 | Y | H | 1.5887 | |
| 111 | G | H | 0.5809 | |
| 112 | S | H | 0.4380 | |
| 113 | N | H | 0.3653 | |
| 114 | S | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | -0.0925 | |
| 118 | W | H | -0.1292 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1677 | |
| 121 | G | H | -0.5908 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.1768 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0135 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6164 | |
| 128 | S | H | -0.8957 | |
| 1 | D | L | -1.7641 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7654 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.6213 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6651 | |
| 8 | H | L | -0.6170 | |
| 9 | L | L | 0.5856 | |
| 10 | S | L | -0.3925 | |
| 11 | M | L | -0.4285 | |
| 12 | S | L | -0.6665 | |
| 13 | T | L | 0.0000 | |
| 14 | S | L | 0.0362 | |
| 15 | L | L | 0.6860 | |
| 16 | G | L | -0.2516 | |
| 17 | D | L | -0.6764 | |
| 18 | P | L | -0.6258 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.2595 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.9859 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.2834 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.2912 | |
| 27 | Q | L | -2.4769 | |
| 28 | D | L | -2.7241 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -0.8175 | |
| 37 | T | L | -0.1726 | |
| 38 | V | L | 0.3221 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.6810 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.3707 | |
| 46 | P | L | -0.9875 | |
| 47 | G | L | -1.3607 | |
| 48 | Q | L | -1.9302 | |
| 49 | S | L | -1.2786 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.1376 | |
| 52 | R | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.4192 | |
| 56 | S | L | 0.3873 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | 0.2414 | |
| 66 | Y | L | 1.0933 | |
| 67 | R | L | -0.1436 | |
| 68 | Y | L | 0.7736 | |
| 69 | I | L | 1.7650 | |
| 70 | G | L | 0.1359 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.0488 | |
| 74 | D | L | -2.2213 | |
| 75 | R | L | -1.3367 | |
| 76 | F | L | 0.0000 | |
| 77 | T | L | -0.5964 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.4407 | |
| 80 | G | L | -1.0030 | |
| 83 | A | L | -1.0874 | |
| 84 | G | L | -1.7357 | |
| 85 | T | L | -2.3921 | |
| 86 | D | L | -2.8298 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7836 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | -0.2966 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.9468 | |
| 93 | S | L | -0.7394 | |
| 94 | V | L | 0.0000 | |
| 95 | Q | L | -0.9353 | |
| 96 | A | L | -0.5708 | |
| 97 | E | L | -1.7864 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.3985 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.3718 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.0000 | |
| 108 | Y | L | 0.6473 | |
| 109 | S | L | -0.0024 | |
| 114 | P | L | -0.5600 | |
| 115 | P | L | -0.8125 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | -0.1227 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.5808 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.1188 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.6113 | |
| 126 | I | L | 0.9550 | |
| 127 | K | L | -0.8438 |