| Chain sequence(s) |
A: MIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEAFGTLPGVWLKSGPELPEKSLRVDALITATIEGRKVMLYTQKVRHFKEVDEPNALHLWVTDNNRTFHLGPFSVDSAENKTFANTLLYSDDALHLLQAKGDHESTAVSLARLTEELNTI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:59)
[INFO] Main: Simulation completed successfully. (00:09:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2453 | |
| 2 | I | A | 0.8626 | |
| 3 | A | A | 0.5740 | |
| 4 | M | A | 0.0000 | |
| 5 | L | A | 0.0000 | |
| 6 | V | A | -0.2806 | |
| 7 | P | A | -1.1790 | |
| 8 | N | A | -2.1272 | |
| 9 | K | A | -2.3425 | |
| 10 | T | A | 0.0000 | |
| 11 | Q | A | -1.7700 | |
| 12 | V | A | 0.0000 | |
| 13 | V | A | -1.5392 | |
| 14 | P | A | -1.9913 | |
| 15 | K | A | -1.9949 | |
| 16 | S | A | -1.5441 | |
| 17 | G | A | -1.6058 | |
| 18 | G | A | -2.0532 | |
| 19 | E | A | -2.6180 | |
| 20 | G | A | -2.2666 | |
| 21 | K | A | -2.4749 | |
| 22 | V | A | -1.2908 | |
| 23 | K | A | 0.0000 | |
| 24 | D | A | -1.3937 | |
| 25 | I | A | 0.0000 | |
| 26 | F | A | 0.0000 | |
| 27 | A | A | -0.0150 | |
| 28 | S | A | 0.0538 | |
| 29 | P | A | 0.0000 | |
| 30 | A | A | 0.0000 | |
| 31 | L | A | 0.0000 | |
| 32 | V | A | 0.0000 | |
| 33 | R | A | -0.9935 | |
| 34 | A | A | 0.0000 | |
| 35 | G | A | -1.7946 | |
| 36 | G | A | -1.8300 | |
| 37 | V | A | 0.0000 | |
| 38 | M | A | 0.0000 | |
| 39 | I | A | 0.0000 | |
| 40 | A | A | 0.0000 | |
| 41 | F | A | 0.0000 | |
| 42 | V | A | 0.0000 | |
| 43 | E | A | 0.0000 | |
| 44 | G | A | 0.0000 | |
| 45 | R | A | -0.6689 | |
| 46 | T | A | -1.1535 | |
| 47 | K | A | -1.5378 | |
| 48 | N | A | -1.5907 | |
| 49 | K | A | -1.9117 | |
| 50 | L | A | -0.6961 | |
| 51 | F | A | 0.0000 | |
| 52 | P | A | -1.2353 | |
| 53 | E | A | -1.5306 | |
| 54 | V | A | 0.1629 | |
| 55 | I | A | 0.6274 | |
| 56 | D | A | -1.5790 | |
| 57 | L | A | 0.0000 | |
| 58 | S | A | 0.0000 | |
| 59 | S | A | 0.0000 | |
| 60 | S | A | 0.0000 | |
| 61 | D | A | -0.8392 | |
| 62 | I | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | A | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | Y | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | K | A | -1.8507 | |
| 69 | A | A | -1.4178 | |
| 70 | P | A | -1.6766 | |
| 71 | E | A | -2.7829 | |
| 72 | T | A | -1.2543 | |
| 73 | W | A | -0.6775 | |
| 74 | Q | A | -1.2286 | |
| 75 | S | A | -1.0384 | |
| 76 | L | A | 0.0000 | |
| 77 | V | A | 0.1569 | |
| 78 | A | A | -0.4554 | |
| 79 | E | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | T | A | -0.5819 | |
| 82 | K | A | -1.2365 | |
| 83 | E | A | -1.5980 | |
| 84 | Y | A | -0.0062 | |
| 85 | W | A | -0.4257 | |
| 86 | Q | A | -0.8410 | |
| 87 | A | A | 0.0000 | |
| 88 | H | A | -0.9190 | |
| 89 | T | A | 0.0000 | |
| 90 | V | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | E | A | -1.7972 | |
| 93 | S | A | -1.2774 | |
| 94 | A | A | -1.3153 | |
| 95 | N | A | -2.4659 | |
| 96 | N | A | -2.5842 | |
| 97 | S | A | -2.2533 | |
| 98 | N | A | -2.3465 | |
| 99 | H | A | -1.8618 | |
| 100 | R | A | -2.6251 | |
| 101 | V | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | V | A | 0.0000 | |
| 104 | A | A | 0.0000 | |
| 105 | R | A | -0.4435 | |
| 106 | L | A | -0.0561 | |
| 107 | P | A | 0.0000 | |
| 108 | T | A | 0.0000 | |
| 109 | G | A | 0.0000 | |
| 110 | I | A | 0.0000 | |
| 111 | T | A | -0.8960 | |
| 112 | R | A | -1.3331 | |
| 113 | G | A | -1.5044 | |
| 114 | N | A | -1.8819 | |
| 115 | K | A | -2.1172 | |
| 116 | V | A | 0.0000 | |
| 117 | F | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | L | A | 0.0000 | |
| 120 | V | A | 0.0000 | |
| 121 | G | A | 0.0000 | |
| 122 | S | A | -0.5723 | |
| 123 | Y | A | -0.5890 | |
| 124 | E | A | 0.0000 | |
| 125 | E | A | -1.7150 | |
| 126 | R | A | -1.9255 | |
| 127 | R | A | -1.3038 | |
| 128 | E | A | -1.0188 | |
| 129 | I | A | 0.5385 | |
| 130 | D | A | -1.4736 | |
| 131 | D | A | -1.4500 | |
| 132 | Y | A | 0.5543 | |
| 133 | I | A | 0.0762 | |
| 134 | W | A | -0.6299 | |
| 135 | K | A | -1.6373 | |
| 136 | A | A | -1.0792 | |
| 137 | E | A | -0.9875 | |
| 138 | A | A | -0.5789 | |
| 139 | W | A | -0.7010 | |
| 140 | N | A | -1.3802 | |
| 141 | I | A | 0.0000 | |
| 142 | K | A | -1.0367 | |
| 143 | V | A | 0.0000 | |
| 144 | I | A | 0.0000 | |
| 145 | E | A | -1.8866 | |
| 146 | G | A | 0.0000 | |
| 147 | E | A | -2.5581 | |
| 148 | A | A | 0.0000 | |
| 149 | T | A | -1.7994 | |
| 150 | Q | A | -1.8766 | |
| 151 | S | A | -1.2965 | |
| 152 | T | A | -1.0267 | |
| 153 | E | A | -1.6393 | |
| 154 | V | A | 0.2797 | |
| 155 | Q | A | -1.1005 | |
| 156 | P | A | -1.2452 | |
| 157 | T | A | -0.6645 | |
| 158 | Q | A | -1.0808 | |
| 159 | P | A | 0.0000 | |
| 160 | I | A | 0.0000 | |
| 161 | N | A | -2.1252 | |
| 162 | W | A | -1.7677 | |
| 163 | S | A | -1.7775 | |
| 164 | E | A | -2.3345 | |
| 165 | P | A | -1.4988 | |
| 166 | K | A | -1.5453 | |
| 167 | P | A | -1.1374 | |
| 168 | L | A | 0.0000 | |
| 169 | F | A | -1.2525 | |
| 170 | Q | A | -1.9681 | |
| 171 | T | A | -1.5074 | |
| 172 | D | A | -2.4804 | |
| 173 | S | A | -2.1068 | |
| 174 | P | A | -2.3732 | |
| 175 | N | A | -3.1400 | |
| 176 | N | A | -3.1346 | |
| 177 | K | A | -3.2382 | |
| 178 | G | A | -3.0240 | |
| 179 | D | A | -3.6431 | |
| 180 | L | A | -2.6632 | |
| 181 | K | A | -2.4987 | |
| 182 | E | A | -1.5051 | |
| 183 | F | A | 0.0000 | |
| 184 | L | A | 0.0000 | |
| 185 | G | A | 0.0000 | |
| 186 | G | A | 0.0000 | |
| 187 | G | A | 0.0000 | |
| 188 | G | A | 0.0000 | |
| 189 | S | A | 0.1319 | |
| 190 | G | A | 0.0000 | |
| 191 | I | A | 0.4318 | |
| 192 | V | A | 0.3477 | |
| 193 | M | A | 0.0000 | |
| 194 | G | A | -1.5584 | |
| 195 | N | A | -1.7152 | |
| 196 | G | A | -0.8991 | |
| 197 | T | A | 0.0000 | |
| 198 | L | A | 0.0000 | |
| 199 | V | A | 0.0000 | |
| 200 | F | A | 0.0000 | |
| 201 | P | A | 0.0000 | |
| 202 | L | A | 0.0000 | |
| 203 | T | A | 0.0000 | |
| 204 | A | A | 0.0000 | |
| 205 | K | A | -2.0629 | |
| 206 | D | A | -2.8392 | |
| 207 | E | A | -3.5215 | |
| 208 | S | A | -2.3992 | |
| 209 | N | A | -2.9787 | |
| 210 | K | A | -1.8551 | |
| 211 | V | A | -0.8619 | |
| 212 | F | A | 0.1267 | |
| 213 | S | A | 0.0000 | |
| 214 | L | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | T | A | 0.0000 | |
| 217 | Y | A | -0.5841 | |
| 218 | S | A | 0.0000 | |
| 219 | T | A | -1.3684 | |
| 220 | D | A | -1.5974 | |
| 221 | D | A | -1.6630 | |
| 222 | G | A | 0.0000 | |
| 223 | Q | A | -2.3826 | |
| 224 | K | A | -2.8813 | |
| 225 | W | A | 0.0000 | |
| 226 | E | A | -1.9542 | |
| 227 | I | A | -1.1911 | |
| 228 | P | A | 0.0000 | |
| 229 | G | A | -1.7152 | |
| 230 | G | A | 0.0000 | |
| 231 | V | A | 0.5315 | |
| 232 | S | A | 0.0000 | |
| 233 | S | A | 0.1464 | |
| 234 | V | A | 0.8133 | |
| 235 | A | A | -0.5998 | |
| 236 | C | A | 0.0000 | |
| 237 | R | A | -0.8821 | |
| 238 | S | A | -0.4971 | |
| 239 | P | A | 0.0000 | |
| 240 | R | A | -0.2284 | |
| 241 | V | A | 0.0000 | |
| 242 | T | A | 0.0000 | |
| 243 | E | A | -0.9728 | |
| 244 | W | A | -1.6288 | |
| 245 | E | A | -3.1499 | |
| 246 | E | A | -3.3359 | |
| 247 | G | A | -2.4656 | |
| 248 | T | A | 0.0000 | |
| 249 | L | A | 0.0000 | |
| 250 | L | A | 0.0000 | |
| 251 | M | A | 0.0000 | |
| 252 | V | A | 0.0000 | |
| 253 | T | A | 0.0000 | |
| 254 | Y | A | -1.3987 | |
| 255 | C | A | 0.0000 | |
| 256 | E | A | -3.1459 | |
| 257 | D | A | -3.1876 | |
| 258 | G | A | 0.0000 | |
| 259 | R | A | 0.0000 | |
| 260 | K | A | -0.8547 | |
| 261 | V | A | 0.0000 | |
| 262 | F | A | 0.0000 | |
| 263 | E | A | -1.0164 | |
| 264 | S | A | 0.0000 | |
| 265 | R | A | -2.9228 | |
| 266 | D | A | -1.9645 | |
| 267 | M | A | -1.1471 | |
| 268 | G | A | 0.0000 | |
| 269 | K | A | -2.0883 | |
| 270 | T | A | -1.3071 | |
| 271 | W | A | -0.9829 | |
| 272 | T | A | -0.6747 | |
| 273 | E | A | -0.8984 | |
| 274 | A | A | 0.0000 | |
| 275 | F | A | 1.2716 | |
| 276 | G | A | 0.0868 | |
| 277 | T | A | -0.2344 | |
| 278 | L | A | 0.0000 | |
| 279 | P | A | -0.4455 | |
| 280 | G | A | -0.0394 | |
| 281 | V | A | 0.0000 | |
| 282 | W | A | 0.0823 | |
| 283 | L | A | -0.7649 | |
| 284 | K | A | -2.2901 | |
| 285 | S | A | -2.4634 | |
| 286 | G | A | -1.9778 | |
| 287 | P | A | -1.4188 | |
| 288 | E | A | -2.2094 | |
| 289 | L | A | -1.9468 | |
| 290 | P | A | -2.0484 | |
| 291 | E | A | -3.2546 | |
| 292 | K | A | -2.5759 | |
| 293 | S | A | -1.5269 | |
| 294 | L | A | 0.0000 | |
| 295 | R | A | -0.9050 | |
| 296 | V | A | 0.0000 | |
| 297 | D | A | 0.0000 | |
| 298 | A | A | 0.0000 | |
| 299 | L | A | 0.0000 | |
| 300 | I | A | 0.2715 | |
| 301 | T | A | -0.0580 | |
| 302 | A | A | 0.0000 | |
| 303 | T | A | -1.7696 | |
| 304 | I | A | -2.0163 | |
| 305 | E | A | -2.7938 | |
| 306 | G | A | -2.4261 | |
| 307 | R | A | -3.0584 | |
| 308 | K | A | -2.4343 | |
| 309 | V | A | 0.0000 | |
| 310 | M | A | 0.0000 | |
| 311 | L | A | 0.0000 | |
| 312 | Y | A | 0.0000 | |
| 313 | T | A | 0.0000 | |
| 314 | Q | A | 0.0000 | |
| 315 | K | A | 0.0000 | |
| 316 | V | A | 0.0143 | |
| 317 | R | A | -0.7870 | |
| 318 | H | A | -1.0856 | |
| 319 | F | A | 0.1632 | |
| 320 | K | A | -1.9097 | |
| 321 | E | A | -2.3226 | |
| 322 | V | A | -0.3064 | |
| 323 | D | A | -2.1668 | |
| 324 | E | A | -2.0501 | |
| 325 | P | A | -1.0875 | |
| 326 | N | A | -0.7061 | |
| 327 | A | A | 0.0000 | |
| 328 | L | A | 0.0000 | |
| 329 | H | A | 0.0000 | |
| 330 | L | A | 0.0000 | |
| 331 | W | A | 0.2220 | |
| 332 | V | A | 0.0000 | |
| 333 | T | A | 0.0000 | |
| 334 | D | A | -1.7982 | |
| 335 | N | A | -1.8689 | |
| 336 | N | A | -2.5327 | |
| 337 | R | A | -2.4734 | |
| 338 | T | A | -1.0380 | |
| 339 | F | A | 0.3693 | |
| 340 | H | A | -0.0173 | |
| 341 | L | A | -0.2043 | |
| 342 | G | A | -0.3651 | |
| 343 | P | A | -0.0302 | |
| 344 | F | A | 0.5568 | |
| 345 | S | A | 0.0000 | |
| 346 | V | A | 0.7321 | |
| 347 | D | A | 0.0000 | |
| 348 | S | A | -1.1902 | |
| 349 | A | A | -1.4277 | |
| 350 | E | A | -2.7874 | |
| 351 | N | A | -2.2925 | |
| 352 | K | A | -1.6791 | |
| 353 | T | A | 0.0000 | |
| 354 | F | A | -0.3462 | |
| 355 | A | A | -0.0933 | |
| 356 | N | A | 0.0000 | |
| 357 | T | A | 0.0000 | |
| 358 | L | A | 0.0000 | |
| 359 | L | A | 0.0359 | |
| 360 | Y | A | -0.4626 | |
| 361 | S | A | -1.5782 | |
| 362 | D | A | -2.9856 | |
| 363 | D | A | -2.9606 | |
| 364 | A | A | -1.7867 | |
| 365 | L | A | 0.0000 | |
| 366 | H | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | L | A | 0.0000 | |
| 369 | Q | A | 0.0000 | |
| 370 | A | A | 0.0000 | |
| 371 | K | A | -1.0780 | |
| 372 | G | A | 0.0000 | |
| 373 | D | A | -2.7306 | |
| 374 | H | A | -2.7207 | |
| 375 | E | A | -2.9895 | |
| 376 | S | A | -2.0985 | |
| 377 | T | A | 0.0000 | |
| 378 | A | A | -0.2396 | |
| 379 | V | A | 0.0000 | |
| 380 | S | A | 0.4082 | |
| 381 | L | A | 0.0000 | |
| 382 | A | A | 0.4489 | |
| 383 | R | A | -0.3724 | |
| 384 | L | A | 0.0000 | |
| 385 | T | A | -1.5627 | |
| 386 | E | A | -2.3842 | |
| 387 | E | A | -1.5467 | |
| 388 | L | A | -1.2618 | |
| 389 | N | A | -1.8042 | |
| 390 | T | A | -0.9518 | |
| 391 | I | A | -0.3140 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine