Project name: query_structure

Status: done

Started: 2026-03-16 20:10:20
Settings
Chain sequence(s) A: ALQDLLRTLKSPSSPQVLNILKSNPQLMAAFIKQRTAKYVAN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:04)
Show buried residues

Minimal score value
-2.4665
Maximal score value
1.0966
Average score
-0.853
Total score value
-35.8277

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
5 A A -0.8240
6 L A -0.5632
7 Q A -1.5014
8 D A -2.0392
9 L A 0.0000
10 L A -0.8378
11 R A -2.4665
12 T A -1.6072
13 L A 0.0000
14 K A -2.1715
15 S A -1.2790
16 P A -0.5942
17 S A -0.6787
18 S A -1.0293
19 P A -1.1136
20 Q A -1.3969
25 V A 0.5263
26 L A 0.8600
27 N A -0.2539
28 I A -0.2157
29 L A 0.0000
30 K A -1.6107
31 S A -1.2136
32 N A -1.1556
33 P A -1.1323
34 Q A -1.1779
35 L A -0.5082
36 M A -0.4962
37 A A -0.7032
38 A A -0.8143
39 F A -0.7947
40 I A 0.0000
41 K A -1.6239
42 Q A -2.0458
43 R A -1.6899
44 T A -0.9201
45 A A -1.1536
46 K A -1.3590
47 Y A -0.1091
48 V A 1.0966
49 A A -0.3131
50 N A -0.9173
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Laboratory of Theory of Biopolymers 2018