| Chain sequence(s) |
A: ALQDLLRTLKSPSSPQVLNILKSNPQLMAAFIKQRTAKYVAN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 5 | A | A | -0.8240 | |
| 6 | L | A | -0.5632 | |
| 7 | Q | A | -1.5014 | |
| 8 | D | A | -2.0392 | |
| 9 | L | A | 0.0000 | |
| 10 | L | A | -0.8378 | |
| 11 | R | A | -2.4665 | |
| 12 | T | A | -1.6072 | |
| 13 | L | A | 0.0000 | |
| 14 | K | A | -2.1715 | |
| 15 | S | A | -1.2790 | |
| 16 | P | A | -0.5942 | |
| 17 | S | A | -0.6787 | |
| 18 | S | A | -1.0293 | |
| 19 | P | A | -1.1136 | |
| 20 | Q | A | -1.3969 | |
| 25 | V | A | 0.5263 | |
| 26 | L | A | 0.8600 | |
| 27 | N | A | -0.2539 | |
| 28 | I | A | -0.2157 | |
| 29 | L | A | 0.0000 | |
| 30 | K | A | -1.6107 | |
| 31 | S | A | -1.2136 | |
| 32 | N | A | -1.1556 | |
| 33 | P | A | -1.1323 | |
| 34 | Q | A | -1.1779 | |
| 35 | L | A | -0.5082 | |
| 36 | M | A | -0.4962 | |
| 37 | A | A | -0.7032 | |
| 38 | A | A | -0.8143 | |
| 39 | F | A | -0.7947 | |
| 40 | I | A | 0.0000 | |
| 41 | K | A | -1.6239 | |
| 42 | Q | A | -2.0458 | |
| 43 | R | A | -1.6899 | |
| 44 | T | A | -0.9201 | |
| 45 | A | A | -1.1536 | |
| 46 | K | A | -1.3590 | |
| 47 | Y | A | -0.1091 | |
| 48 | V | A | 1.0966 | |
| 49 | A | A | -0.3131 | |
| 50 | N | A | -0.9173 |