| Chain sequence(s) |
A: MSHHHHHHSGGSTRISEEEHEKLDELNREFYEITGGFMHVRSNDDGTLDVKIYIPKDGKYEVVEELKNVSFEELIKKLKELIEKLKKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:20)
[INFO] Main: Simulation completed successfully. (00:04:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5637 | |
| 2 | S | A | -0.6062 | |
| 3 | H | A | -1.7243 | |
| 4 | H | A | -2.3309 | |
| 5 | H | A | -2.7082 | |
| 6 | H | A | -2.7457 | |
| 7 | H | A | -2.5318 | |
| 8 | H | A | -2.2565 | |
| 9 | S | A | -1.5581 | |
| 10 | G | A | -1.5640 | |
| 11 | G | A | -1.8735 | |
| 12 | S | A | -2.1234 | |
| 13 | T | A | -1.9762 | |
| 14 | R | A | -2.9832 | |
| 15 | I | A | -2.1594 | |
| 16 | S | A | -2.6708 | |
| 17 | E | A | -3.9918 | |
| 18 | E | A | -4.2076 | |
| 19 | E | A | -3.9218 | |
| 20 | H | A | -4.3509 | |
| 21 | E | A | -5.0293 | |
| 22 | K | A | -4.4381 | |
| 23 | L | A | 0.0000 | |
| 24 | D | A | -4.4180 | |
| 25 | E | A | -4.4241 | |
| 26 | L | A | 0.0000 | |
| 27 | N | A | -2.7514 | |
| 28 | R | A | -3.5165 | |
| 29 | E | A | -2.9906 | |
| 30 | F | A | 0.0000 | |
| 31 | Y | A | -0.4656 | |
| 32 | E | A | -1.8076 | |
| 33 | I | A | -0.9294 | |
| 34 | T | A | -0.3300 | |
| 35 | G | A | -0.1576 | |
| 36 | G | A | 0.0000 | |
| 37 | F | A | 0.4779 | |
| 38 | M | A | 0.0000 | |
| 39 | H | A | -1.5079 | |
| 40 | V | A | -1.0552 | |
| 41 | R | A | -2.7437 | |
| 42 | S | A | -2.2234 | |
| 43 | N | A | -2.7680 | |
| 44 | D | A | -3.3587 | |
| 45 | D | A | -3.2044 | |
| 46 | G | A | -2.5378 | |
| 47 | T | A | -2.1927 | |
| 48 | L | A | 0.0000 | |
| 49 | D | A | -2.4188 | |
| 50 | V | A | 0.0000 | |
| 51 | K | A | -2.0330 | |
| 52 | I | A | 0.0000 | |
| 53 | Y | A | 0.0494 | |
| 54 | I | A | -0.0467 | |
| 55 | P | A | -1.2911 | |
| 56 | K | A | -2.9235 | |
| 57 | D | A | -3.2358 | |
| 58 | G | A | -2.5616 | |
| 59 | K | A | -2.8409 | |
| 60 | Y | A | -0.8459 | |
| 61 | E | A | -1.1758 | |
| 62 | V | A | 0.3561 | |
| 63 | V | A | 0.1225 | |
| 64 | E | A | -1.3246 | |
| 65 | E | A | -2.6100 | |
| 66 | L | A | -2.3318 | |
| 67 | K | A | -2.8409 | |
| 68 | N | A | -2.1494 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | -1.6160 | |
| 71 | F | A | -1.6470 | |
| 72 | E | A | -2.7889 | |
| 73 | E | A | -2.8527 | |
| 74 | L | A | 0.0000 | |
| 75 | I | A | -2.5988 | |
| 76 | K | A | -3.7236 | |
| 77 | K | A | -3.2573 | |
| 78 | L | A | 0.0000 | |
| 79 | K | A | -3.8291 | |
| 80 | E | A | -4.1993 | |
| 81 | L | A | 0.0000 | |
| 82 | I | A | 0.0000 | |
| 83 | E | A | -4.3823 | |
| 84 | K | A | -4.1711 | |
| 85 | L | A | -3.0455 | |
| 86 | K | A | -3.8451 | |
| 87 | K | A | -3.9695 | |
| 88 | N | A | -3.1833 | |
| 89 | S | A | -1.9157 |