| Chain sequence(s) |
A: KLDLKLDLKLDL
C: KLDLKLDLKLDL B: KLDLKLDLKLDL E: KLDLKLDLKLDL D: KLDLKLDLKLDL G: KLDLKLDLKLDL F: KLDLKLDLKLDL H: KLDLKLDLKLDL input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:46)
[INFO] Main: Simulation completed successfully. (00:03:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.6162 | |
| 2 | L | A | -0.8193 | |
| 3 | D | A | -2.2169 | |
| 4 | L | A | -1.0037 | |
| 5 | K | A | -2.1317 | |
| 6 | L | A | -1.0722 | |
| 7 | D | A | -2.4073 | |
| 8 | L | A | -1.1683 | |
| 9 | K | A | -1.9949 | |
| 10 | L | A | -0.5920 | |
| 11 | D | A | -1.2507 | |
| 12 | L | A | 0.6647 | |
| 1 | K | B | -1.0577 | |
| 2 | L | B | -0.6920 | |
| 3 | D | B | -1.8565 | |
| 4 | L | B | -1.3549 | |
| 5 | K | B | -2.2580 | |
| 6 | L | B | -1.1501 | |
| 7 | D | B | -1.7483 | |
| 8 | L | B | -1.0252 | |
| 9 | K | B | -1.9463 | |
| 10 | L | B | -1.0663 | |
| 11 | D | B | -1.0020 | |
| 12 | L | B | 0.7998 | |
| 1 | K | C | -1.1192 | |
| 2 | L | C | -1.0601 | |
| 3 | D | C | -1.5096 | |
| 4 | L | C | -0.9869 | |
| 5 | K | C | -1.3540 | |
| 6 | L | C | -1.1772 | |
| 7 | D | C | -1.6234 | |
| 8 | L | C | -1.3628 | |
| 9 | K | C | -1.4718 | |
| 10 | L | C | -0.8690 | |
| 11 | D | C | -0.5388 | |
| 12 | L | C | 0.9832 | |
| 1 | K | D | -0.9915 | |
| 2 | L | D | -0.8714 | |
| 3 | D | D | -1.6854 | |
| 4 | L | D | -1.2131 | |
| 5 | K | D | -1.9063 | |
| 6 | L | D | -1.0685 | |
| 7 | D | D | -1.2845 | |
| 8 | L | D | -1.1067 | |
| 9 | K | D | -2.0352 | |
| 10 | L | D | -1.4121 | |
| 11 | D | D | -0.8664 | |
| 12 | L | D | 0.8210 | |
| 1 | K | E | -2.0108 | |
| 2 | L | E | -1.5919 | |
| 3 | D | E | -2.1823 | |
| 4 | L | E | -1.3026 | |
| 5 | K | E | -1.9952 | |
| 6 | L | E | -1.2002 | |
| 7 | D | E | -1.6536 | |
| 8 | L | E | -1.3329 | |
| 9 | K | E | -1.9002 | |
| 10 | L | E | -0.9781 | |
| 11 | D | E | -0.9070 | |
| 12 | L | E | 0.9472 | |
| 1 | K | F | -0.9320 | |
| 2 | L | F | -0.9556 | |
| 3 | D | F | -1.6296 | |
| 4 | L | F | -1.3246 | |
| 5 | K | F | -2.0298 | |
| 6 | L | F | -1.4321 | |
| 7 | D | F | -1.8480 | |
| 8 | L | F | -1.7237 | |
| 9 | K | F | -2.7693 | |
| 10 | L | F | -2.0385 | |
| 11 | D | F | -1.5241 | |
| 12 | L | F | 0.3526 | |
| 1 | K | G | -2.3010 | |
| 2 | L | G | -1.5704 | |
| 3 | D | G | -2.6831 | |
| 4 | L | G | -1.6266 | |
| 5 | K | G | -2.5091 | |
| 6 | L | G | -1.2681 | |
| 7 | D | G | -2.0516 | |
| 8 | L | G | -1.2562 | |
| 9 | K | G | -2.0702 | |
| 10 | L | G | -0.8179 | |
| 11 | D | G | -1.0018 | |
| 12 | L | G | 0.8326 | |
| 1 | K | H | -1.7081 | |
| 2 | L | H | -0.8679 | |
| 3 | D | H | -2.2971 | |
| 4 | L | H | -0.9318 | |
| 5 | K | H | -2.2103 | |
| 6 | L | H | -0.9634 | |
| 7 | D | H | -2.4106 | |
| 8 | L | H | -1.3321 | |
| 9 | K | H | -2.4658 | |
| 10 | L | H | -1.0440 | |
| 11 | D | H | -1.7620 | |
| 12 | L | H | 0.2933 |