Project name: query_structure

Status: done

Started: 2026-03-16 23:00:56
Settings
Chain sequence(s) A: CKSPGSSCSPTSYNCCRSCNPYTKRCY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:09)
Show buried residues

Minimal score value
-2.7975
Maximal score value
0.4798
Average score
-0.8109
Total score value
-21.8955

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.0553
2 K A -1.1287
3 S A -0.9790
4 P A -0.9452
5 G A -1.5010
6 S A -1.5420
7 S A -1.8967
8 C A 0.0000
9 S A -1.1971
10 P A -0.7774
11 T A -0.3407
12 S A -0.2347
13 Y A -0.3666
14 N A -1.2279
15 C A -0.9292
16 C A -0.1593
17 R A -1.5054
18 S A -0.8801
19 C A 0.0000
20 N A -0.7593
21 P A -0.1607
22 Y A 0.4798
23 T A -0.7959
24 K A -2.1702
25 R A -2.7975
26 C A 0.0000
27 Y A -0.1360
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Laboratory of Theory of Biopolymers 2018