| Chain sequence(s) |
A: AAGAGNQQSNTLTLG
B: VLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQ input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:22)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.5116 | |
| 2 | A | A | 0.1487 | |
| 3 | G | A | 0.2404 | |
| 4 | A | A | -0.1833 | |
| 5 | G | A | -0.9466 | |
| 6 | N | A | -1.9442 | |
| 7 | Q | A | -1.9215 | |
| 8 | Q | A | -1.5386 | |
| 9 | S | A | -1.2358 | |
| 10 | N | A | -1.0930 | |
| 11 | T | A | -0.2034 | |
| 12 | L | A | 0.9646 | |
| 13 | T | A | 1.9580 | |
| 14 | L | A | 3.0120 | |
| 15 | G | A | 2.0925 | |
| 37 | V | B | 3.3174 | |
| 38 | L | B | 3.7251 | |
| 39 | Y | B | 3.6790 | |
| 40 | V | B | 3.2113 | |
| 41 | G | B | 1.0831 | |
| 42 | S | B | 0.5635 | |
| 43 | K | B | -1.4606 | |
| 44 | T | B | -1.0472 | |
| 45 | K | B | -1.2741 | |
| 46 | E | B | -1.4869 | |
| 47 | G | B | -1.0116 | |
| 48 | V | B | -0.2261 | |
| 49 | V | B | -0.5953 | |
| 50 | H | B | -1.0168 | |
| 51 | G | B | -0.8664 | |
| 52 | V | B | -0.0480 | |
| 53 | A | B | 0.3428 | |
| 54 | T | B | 0.5717 | |
| 55 | V | B | 0.8702 | |
| 56 | A | B | -0.6209 | |
| 57 | E | B | -2.3567 | |
| 58 | K | B | -3.3304 | |
| 59 | T | B | -2.5248 | |
| 60 | K | B | -3.6500 | |
| 61 | E | B | -3.3729 | |
| 62 | Q | B | -2.0842 | |
| 63 | V | B | 0.0802 | |
| 64 | T | B | -0.1893 | |
| 65 | N | B | -0.2856 | |
| 66 | V | B | 0.7583 | |
| 67 | G | B | 0.1054 | |
| 68 | G | B | 0.2999 | |
| 69 | A | B | 0.7830 | |
| 70 | V | B | 1.6460 | |
| 71 | V | B | 1.8931 | |
| 72 | T | B | 0.9350 | |
| 73 | G | B | 0.4234 | |
| 74 | V | B | 1.5746 | |
| 75 | T | B | 0.9666 | |
| 76 | A | B | 0.4784 | |
| 77 | V | B | 1.3407 | |
| 78 | A | B | 0.0325 | |
| 79 | Q | B | -0.9114 | |
| 80 | K | B | -1.7103 | |
| 81 | T | B | -0.8649 | |
| 82 | V | B | 0.1991 | |
| 83 | E | B | -1.2251 | |
| 84 | G | B | -1.0305 | |
| 85 | A | B | -0.5250 | |
| 86 | G | B | -0.5610 | |
| 87 | S | B | 0.2403 | |
| 88 | I | B | 1.5794 | |
| 89 | A | B | 1.3271 | |
| 90 | A | B | 0.7383 | |
| 91 | A | B | 0.9167 | |
| 92 | T | B | 0.8019 | |
| 93 | G | B | 1.0324 | |
| 94 | F | B | 2.0228 | |
| 95 | V | B | 1.3737 | |
| 96 | K | B | -1.6288 | |
| 97 | K | B | -3.2845 | |
| 98 | D | B | -3.5852 | |
| 99 | Q | B | -2.4330 |