Project name: fapc-asyn (cluster1)

Status: done

Started: 2026-03-24 12:19:37
Settings
Chain sequence(s) A: AAGAGNQQSNTLTLG
B: VLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQ
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:23)
Show buried residues

Minimal score value
-3.65
Maximal score value
3.7251
Average score
-0.0956
Total score value
-7.4564

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.5116
2 A A 0.1487
3 G A 0.2404
4 A A -0.1833
5 G A -0.9466
6 N A -1.9442
7 Q A -1.9215
8 Q A -1.5386
9 S A -1.2358
10 N A -1.0930
11 T A -0.2034
12 L A 0.9646
13 T A 1.9580
14 L A 3.0120
15 G A 2.0925
37 V B 3.3174
38 L B 3.7251
39 Y B 3.6790
40 V B 3.2113
41 G B 1.0831
42 S B 0.5635
43 K B -1.4606
44 T B -1.0472
45 K B -1.2741
46 E B -1.4869
47 G B -1.0116
48 V B -0.2261
49 V B -0.5953
50 H B -1.0168
51 G B -0.8664
52 V B -0.0480
53 A B 0.3428
54 T B 0.5717
55 V B 0.8702
56 A B -0.6209
57 E B -2.3567
58 K B -3.3304
59 T B -2.5248
60 K B -3.6500
61 E B -3.3729
62 Q B -2.0842
63 V B 0.0802
64 T B -0.1893
65 N B -0.2856
66 V B 0.7583
67 G B 0.1054
68 G B 0.2999
69 A B 0.7830
70 V B 1.6460
71 V B 1.8931
72 T B 0.9350
73 G B 0.4234
74 V B 1.5746
75 T B 0.9666
76 A B 0.4784
77 V B 1.3407
78 A B 0.0325
79 Q B -0.9114
80 K B -1.7103
81 T B -0.8649
82 V B 0.1991
83 E B -1.2251
84 G B -1.0305
85 A B -0.5250
86 G B -0.5610
87 S B 0.2403
88 I B 1.5794
89 A B 1.3271
90 A B 0.7383
91 A B 0.9167
92 T B 0.8019
93 G B 1.0324
94 F B 2.0228
95 V B 1.3737
96 K B -1.6288
97 K B -3.2845
98 D B -3.5852
99 Q B -2.4330
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Laboratory of Theory of Biopolymers 2018