| Chain sequence(s) |
A: FQFGHGFQF
C: FQFGHGFQF B: FQFGHGFQF D: FQFGHGFQF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32)
[INFO] Main: Simulation completed successfully. (00:00:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.9723 | |
| 2 | Q | A | 1.1572 | |
| 3 | F | A | 2.0904 | |
| 4 | G | A | 0.8494 | |
| 5 | H | A | -0.0389 | |
| 6 | G | A | 1.6566 | |
| 7 | F | A | 3.1117 | |
| 8 | Q | A | 2.4620 | |
| 9 | F | A | 3.0679 | |
| 1 | F | B | 0.0000 | |
| 2 | Q | B | 1.9764 | |
| 3 | F | B | 2.1524 | |
| 4 | G | B | 0.8270 | |
| 5 | H | B | 0.5421 | |
| 6 | G | B | 1.2964 | |
| 7 | F | B | 2.8410 | |
| 8 | Q | B | 2.6025 | |
| 9 | F | B | 3.0208 | |
| 1 | F | C | 4.0507 | |
| 2 | Q | C | 3.1343 | |
| 3 | F | C | 2.8307 | |
| 4 | G | C | 0.8279 | |
| 5 | H | C | -0.7293 | |
| 6 | G | C | 0.5375 | |
| 7 | F | C | 1.4179 | |
| 8 | Q | C | 1.3970 | |
| 9 | F | C | 2.4869 | |
| 1 | F | D | 2.0125 | |
| 2 | Q | D | 1.1512 | |
| 3 | F | D | 1.8342 | |
| 4 | G | D | 0.3643 | |
| 5 | H | D | -0.5167 | |
| 6 | G | D | 0.0000 | |
| 7 | F | D | 2.9083 | |
| 8 | Q | D | 0.0000 | |
| 9 | F | D | 4.2416 |