| Chain sequence(s) |
A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYIQYYDLYYASPSSINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4094 | |
| 2 | S | A | -0.0384 | |
| 3 | S | A | 0.3849 | |
| 4 | V | A | 1.5279 | |
| 5 | S | A | 0.6666 | |
| 6 | S | A | 0.0000 | |
| 7 | V | A | 0.4782 | |
| 8 | P | A | 0.0000 | |
| 9 | T | A | -1.5511 | |
| 10 | K | A | -2.4492 | |
| 11 | L | A | -1.4094 | |
| 12 | E | A | -1.3334 | |
| 13 | V | A | 0.3847 | |
| 14 | V | A | 1.6892 | |
| 15 | A | A | 0.9497 | |
| 16 | A | A | 0.2887 | |
| 17 | T | A | -0.3901 | |
| 18 | P | A | -0.8125 | |
| 19 | T | A | -0.5329 | |
| 20 | S | A | -0.3190 | |
| 21 | L | A | 0.0000 | |
| 22 | L | A | 0.7971 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -0.5560 | |
| 25 | W | A | 0.0000 | |
| 26 | D | A | -2.4121 | |
| 27 | A | A | -1.1282 | |
| 28 | S | A | -0.4998 | |
| 29 | S | A | -0.1954 | |
| 30 | S | A | -0.3641 | |
| 31 | S | A | -0.3648 | |
| 32 | V | A | 0.0000 | |
| 33 | S | A | -0.0968 | |
| 34 | Y | A | 0.0354 | |
| 35 | Y | A | 0.0000 | |
| 36 | R | A | -0.4622 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | -0.7175 | |
| 39 | Y | A | 0.0000 | |
| 40 | G | A | 0.0000 | |
| 41 | E | A | -1.3820 | |
| 42 | T | A | -1.2281 | |
| 43 | G | A | -1.2327 | |
| 44 | G | A | -1.3580 | |
| 45 | N | A | -1.5446 | |
| 46 | S | A | -0.9159 | |
| 47 | P | A | -0.4308 | |
| 48 | V | A | 0.2314 | |
| 49 | Q | A | -1.2518 | |
| 50 | E | A | -1.8453 | |
| 51 | F | A | -0.7095 | |
| 52 | T | A | -0.1849 | |
| 53 | V | A | 0.0842 | |
| 54 | P | A | -0.2110 | |
| 55 | G | A | -0.2119 | |
| 56 | S | A | -0.3311 | |
| 57 | S | A | -0.4018 | |
| 58 | S | A | -0.6206 | |
| 59 | T | A | -0.1704 | |
| 60 | A | A | 0.0000 | |
| 61 | T | A | 0.2493 | |
| 62 | I | A | 0.0000 | |
| 63 | S | A | -0.4750 | |
| 64 | G | A | -0.6857 | |
| 65 | L | A | 0.0000 | |
| 66 | S | A | -0.8381 | |
| 67 | P | A | -0.9938 | |
| 68 | G | A | -1.0803 | |
| 69 | V | A | -0.9410 | |
| 70 | D | A | -1.8349 | |
| 71 | Y | A | 0.0000 | |
| 72 | T | A | -0.8145 | |
| 73 | I | A | 0.0000 | |
| 74 | T | A | -0.5034 | |
| 75 | V | A | 0.0000 | |
| 76 | Y | A | 0.2657 | |
| 77 | A | A | 0.0000 | |
| 78 | Y | A | 0.8000 | |
| 79 | I | A | 0.0000 | |
| 80 | Q | A | 0.2373 | |
| 81 | Y | A | 1.1212 | |
| 82 | Y | A | 1.0838 | |
| 83 | D | A | -0.1914 | |
| 84 | L | A | 1.6460 | |
| 85 | Y | A | 2.0187 | |
| 86 | Y | A | 1.8825 | |
| 87 | A | A | 0.9583 | |
| 88 | S | A | 0.6893 | |
| 89 | P | A | 0.0036 | |
| 90 | S | A | -0.1837 | |
| 91 | S | A | -0.4753 | |
| 92 | I | A | -0.6938 | |
| 93 | N | A | -1.6784 | |
| 94 | Y | A | -1.3696 | |
| 95 | R | A | -2.3218 | |
| 96 | T | A | -1.1781 |