Project name: query_structure

Status: done

Started: 2026-03-16 23:37:14
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Chain sequence(s) A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYIQYYDLYYASPSSINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:53)
Show buried residues

Minimal score value
-2.4492
Maximal score value
2.0187
Average score
-0.2902
Total score value
-27.8578

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4094
2 S A -0.0384
3 S A 0.3849
4 V A 1.5279
5 S A 0.6666
6 S A 0.0000
7 V A 0.4782
8 P A 0.0000
9 T A -1.5511
10 K A -2.4492
11 L A -1.4094
12 E A -1.3334
13 V A 0.3847
14 V A 1.6892
15 A A 0.9497
16 A A 0.2887
17 T A -0.3901
18 P A -0.8125
19 T A -0.5329
20 S A -0.3190
21 L A 0.0000
22 L A 0.7971
23 I A 0.0000
24 S A -0.5560
25 W A 0.0000
26 D A -2.4121
27 A A -1.1282
28 S A -0.4998
29 S A -0.1954
30 S A -0.3641
31 S A -0.3648
32 V A 0.0000
33 S A -0.0968
34 Y A 0.0354
35 Y A 0.0000
36 R A -0.4622
37 I A 0.0000
38 T A -0.7175
39 Y A 0.0000
40 G A 0.0000
41 E A -1.3820
42 T A -1.2281
43 G A -1.2327
44 G A -1.3580
45 N A -1.5446
46 S A -0.9159
47 P A -0.4308
48 V A 0.2314
49 Q A -1.2518
50 E A -1.8453
51 F A -0.7095
52 T A -0.1849
53 V A 0.0842
54 P A -0.2110
55 G A -0.2119
56 S A -0.3311
57 S A -0.4018
58 S A -0.6206
59 T A -0.1704
60 A A 0.0000
61 T A 0.2493
62 I A 0.0000
63 S A -0.4750
64 G A -0.6857
65 L A 0.0000
66 S A -0.8381
67 P A -0.9938
68 G A -1.0803
69 V A -0.9410
70 D A -1.8349
71 Y A 0.0000
72 T A -0.8145
73 I A 0.0000
74 T A -0.5034
75 V A 0.0000
76 Y A 0.2657
77 A A 0.0000
78 Y A 0.8000
79 I A 0.0000
80 Q A 0.2373
81 Y A 1.1212
82 Y A 1.0838
83 D A -0.1914
84 L A 1.6460
85 Y A 2.0187
86 Y A 1.8825
87 A A 0.9583
88 S A 0.6893
89 P A 0.0036
90 S A -0.1837
91 S A -0.4753
92 I A -0.6938
93 N A -1.6784
94 Y A -1.3696
95 R A -2.3218
96 T A -1.1781
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Laboratory of Theory of Biopolymers 2018