Project name: query_structure

Status: done

Started: 2026-03-16 23:01:55
Settings
Chain sequence(s) A: CSCKSKVCYRNGIPCAESCVYIPCLTSAIG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-1.6333
Maximal score value
2.222
Average score
0.3984
Total score value
11.9524

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A -0.0702
2 S A -0.4475
3 C A -0.3434
4 K A -1.5925
5 S A -1.2263
6 K A -1.1309
7 V A -0.1766
8 C A 0.0000
9 Y A -0.4047
10 R A -1.5064
11 N A -1.6333
12 G A -0.7535
13 I A 0.8774
14 P A 0.2862
15 C A 0.3867
16 A A 0.3631
17 E A 0.7409
18 S A 0.7198
19 C A 0.9198
20 V A 1.3812
21 Y A 1.9034
22 I A 1.8687
23 P A 1.3518
24 C A 1.7724
25 L A 2.2220
26 T A 1.2674
27 S A 0.7861
28 A A 1.4592
29 I A 2.1996
30 G A 0.7320
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Laboratory of Theory of Biopolymers 2018