| Chain sequence(s) |
A: METVITADVLRRGGVDVTRAGLAGNGPVTCSRNVVIKPDAAFTDAIKKDYDVIIRPGGMKGAESLAASSAVGDLLKKQEEKNAFIACICAAPIALKSHGIAKGKKITSHPSVDKQLKEAGYNYSEDRVVVDGKLMTSRGPGTTFEFALAIVEILVGKE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:18)
[INFO] Main: Simulation completed successfully. (00:05:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2820 | |
| 2 | E | A | 0.7130 | |
| 3 | T | A | 0.4037 | |
| 4 | V | A | 0.6079 | |
| 5 | I | A | 0.7340 | |
| 6 | T | A | 0.0000 | |
| 7 | A | A | -1.1880 | |
| 8 | D | A | -2.2077 | |
| 9 | V | A | 0.0000 | |
| 10 | L | A | 0.0000 | |
| 11 | R | A | -3.3277 | |
| 12 | R | A | -3.3391 | |
| 13 | G | A | -1.8362 | |
| 14 | G | A | -1.6657 | |
| 15 | V | A | -1.7186 | |
| 16 | D | A | -2.4084 | |
| 17 | V | A | -1.4315 | |
| 18 | T | A | -1.1079 | |
| 19 | R | A | -1.3866 | |
| 20 | A | A | -1.1728 | |
| 21 | G | A | 0.0000 | |
| 22 | L | A | 0.2525 | |
| 23 | A | A | -0.0334 | |
| 24 | G | A | -0.8769 | |
| 25 | N | A | -2.3426 | |
| 26 | G | A | -1.5507 | |
| 27 | P | A | -0.6361 | |
| 28 | V | A | 0.6677 | |
| 29 | T | A | 0.4432 | |
| 30 | C | A | 0.0608 | |
| 31 | S | A | -1.0315 | |
| 32 | R | A | -1.7680 | |
| 33 | N | A | -0.9173 | |
| 34 | V | A | 1.3422 | |
| 35 | V | A | 1.7440 | |
| 36 | I | A | 0.4275 | |
| 37 | K | A | -1.8709 | |
| 38 | P | A | 0.0000 | |
| 39 | D | A | -2.5979 | |
| 40 | A | A | -2.0147 | |
| 41 | A | A | 0.0000 | |
| 42 | F | A | 0.0000 | |
| 43 | T | A | -1.0275 | |
| 44 | D | A | -2.1978 | |
| 45 | A | A | 0.0000 | |
| 46 | I | A | -1.3252 | |
| 47 | K | A | -2.4408 | |
| 48 | K | A | -2.5769 | |
| 49 | D | A | -3.0034 | |
| 50 | Y | A | -1.8357 | |
| 51 | D | A | -2.0973 | |
| 52 | V | A | -0.5189 | |
| 53 | I | A | 0.0000 | |
| 54 | I | A | 0.2555 | |
| 55 | R | A | 0.0000 | |
| 56 | P | A | 0.1727 | |
| 57 | G | A | -0.4546 | |
| 58 | G | A | -0.9080 | |
| 59 | M | A | -0.9849 | |
| 60 | K | A | -2.3009 | |
| 61 | G | A | -1.5006 | |
| 62 | A | A | 0.0000 | |
| 63 | E | A | -2.4377 | |
| 64 | S | A | -1.3940 | |
| 65 | L | A | 0.0000 | |
| 66 | A | A | -1.0319 | |
| 67 | A | A | -0.5718 | |
| 68 | S | A | -0.5646 | |
| 69 | S | A | -0.6744 | |
| 70 | A | A | -0.6590 | |
| 71 | V | A | 0.0000 | |
| 72 | G | A | 0.0000 | |
| 73 | D | A | -2.6137 | |
| 74 | L | A | 0.0000 | |
| 75 | L | A | 0.0000 | |
| 76 | K | A | -3.6247 | |
| 77 | K | A | -3.9615 | |
| 78 | Q | A | 0.0000 | |
| 79 | E | A | -3.8140 | |
| 80 | E | A | -4.1995 | |
| 81 | K | A | -4.1101 | |
| 82 | N | A | -3.6427 | |
| 83 | A | A | -2.6444 | |
| 84 | F | A | -0.9396 | |
| 85 | I | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | C | A | 0.0000 | |
| 88 | I | A | 0.0000 | |
| 89 | C | A | -0.3090 | |
| 90 | A | A | 0.0000 | |
| 91 | A | A | 0.0000 | |
| 92 | P | A | 0.0000 | |
| 93 | I | A | -0.8925 | |
| 94 | A | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | K | A | -1.1494 | |
| 97 | S | A | -0.6908 | |
| 98 | H | A | -0.8440 | |
| 99 | G | A | -0.9400 | |
| 100 | I | A | 0.0000 | |
| 101 | A | A | -1.8664 | |
| 102 | K | A | -2.4534 | |
| 103 | G | A | -2.0841 | |
| 104 | K | A | -2.2026 | |
| 105 | K | A | -1.9328 | |
| 106 | I | A | 0.0000 | |
| 107 | T | A | 0.0000 | |
| 108 | S | A | 0.0000 | |
| 109 | H | A | -1.2573 | |
| 110 | P | A | -1.1760 | |
| 111 | S | A | -0.9430 | |
| 112 | V | A | 0.0000 | |
| 113 | D | A | -2.1557 | |
| 114 | K | A | -3.0604 | |
| 115 | Q | A | -2.4636 | |
| 116 | L | A | 0.0000 | |
| 117 | K | A | -2.7994 | |
| 118 | E | A | -3.0086 | |
| 119 | A | A | -1.5008 | |
| 120 | G | A | -1.8261 | |
| 121 | Y | A | -1.8813 | |
| 122 | N | A | -2.0464 | |
| 123 | Y | A | -1.5163 | |
| 124 | S | A | -2.0540 | |
| 125 | E | A | -3.1286 | |
| 126 | D | A | -3.2284 | |
| 127 | R | A | -3.0162 | |
| 128 | V | A | -1.0442 | |
| 129 | V | A | 0.0000 | |
| 130 | V | A | -0.0386 | |
| 131 | D | A | -1.1675 | |
| 132 | G | A | -1.2875 | |
| 133 | K | A | -1.4128 | |
| 134 | L | A | 0.0000 | |
| 135 | M | A | 0.0000 | |
| 136 | T | A | 0.0000 | |
| 137 | S | A | 0.0000 | |
| 138 | R | A | -1.5839 | |
| 139 | G | A | 0.0000 | |
| 140 | P | A | 0.1030 | |
| 141 | G | A | -0.3617 | |
| 142 | T | A | 0.0000 | |
| 143 | T | A | 0.0000 | |
| 144 | F | A | 1.6707 | |
| 145 | E | A | 0.1558 | |
| 146 | F | A | 0.0000 | |
| 147 | A | A | 0.0000 | |
| 148 | L | A | 0.7964 | |
| 149 | A | A | 0.4879 | |
| 150 | I | A | 0.0000 | |
| 151 | V | A | -0.2132 | |
| 152 | E | A | -0.8018 | |
| 153 | I | A | 0.4173 | |
| 154 | L | A | 0.6916 | |
| 155 | V | A | 0.7995 | |
| 156 | G | A | -0.8614 | |
| 157 | K | A | -2.4260 | |
| 158 | E | A | -2.5914 |