Project name: query_structure

Status: done

Started: 2026-03-16 19:56:10
Settings
Chain sequence(s) B: AQLHSTVRAVPGNENSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQYEDEHWFPGTMYYLTLEAKDGGKKKLYEAKVWVKNTAAPPSHMNFKELQEFKPV
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:03)
Show buried residues

Minimal score value
-4.2684
Maximal score value
1.3106
Average score
-1.1738
Total score value
-120.8999

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 A B -0.9690
3 Q B -1.8910
4 L B -1.2272
5 H B -1.1844
6 S B -0.4647
7 T B 0.1628
8 V B 0.5536
9 R B -0.2824
10 A B -0.6581
11 V B -1.1293
12 P B -1.4329
13 G B -1.6060
14 N B -2.0958
15 E B -1.7333
16 N B -1.8316
17 S B -1.5507
18 L B -0.7791
19 E B -2.3390
20 I B 0.0000
21 E B -2.8857
22 E B -3.1667
23 L B 0.0000
24 A B 0.0000
25 R B -3.4622
26 F B -2.1582
27 A B 0.0000
28 V B 0.0000
29 D B -3.4508
30 E B -3.2410
31 H B -3.1866
32 N B -3.1739
33 K B -4.0799
34 K B -4.2684
35 E B -3.8984
36 N B -3.2214
37 A B -1.7796
38 L B -0.2393
39 L B 0.0000
40 E B -2.9187
41 F B -2.1136
42 V B -1.5331
43 R B -2.1176
44 V B -1.4490
45 V B -0.3035
46 K B -1.7843
47 A B 0.0000
48 K B -1.0950
49 E B 0.0000
50 Q B -0.0995
51 Y B -0.5485
52 E B -1.5948
53 D B -2.9782
54 E B -2.7429
55 H B -1.3494
56 W B 0.7530
57 F B 1.2713
58 P B -0.3273
59 G B 0.0000
60 T B -0.2749
61 M B 0.0000
62 Y B -0.1300
63 Y B -0.6659
64 L B 0.0000
65 T B 0.0000
66 L B 0.0000
67 E B -1.7801
68 A B 0.0000
69 K B -3.0757
70 D B -2.5633
71 G B -1.9553
72 G B -2.7402
73 K B -3.6956
74 K B -3.5683
75 K B -1.6968
76 L B -0.3491
77 Y B 0.0000
78 E B -0.7655
79 A B 0.0000
80 K B -1.6282
81 V B 0.0000
82 W B -0.7318
83 V B 0.0000
84 K B -0.3304
85 N B -0.3781
86 T B 0.5444
87 A B -0.0493
88 A B -0.3331
89 P B -0.6277
90 P B -0.6303
91 S B -0.4107
92 H B -0.4851
93 M B 0.5097
94 N B 0.0124
95 F B 0.3041
96 K B -1.1908
97 E B -1.5701
98 L B 0.0000
99 Q B -2.0485
100 E B -2.6887
101 F B -1.8393
102 K B -1.6382
103 P B -0.1388
104 V B 1.3106
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Laboratory of Theory of Biopolymers 2018