Project name: protein 9

Status: done

Started: 2025-07-18 12:45:50
Settings
Chain sequence(s) A: MQNIFLANAADVGGSFSKHWELFSEMEGENQMKLANRSSEVEYKNGQEYVMLESASNTHSYKLDVWRYKHVNFVEFSLVPWPSLDTGMQVAATMRMSAERGNVAKGYKLHG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:42)
Show buried residues

Minimal score value
-3.2696
Maximal score value
1.1594
Average score
-0.9999
Total score value
-110.9875

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.1396
2 Q A -1.1344
3 N A -1.0895
4 I A 0.2440
5 F A 0.8139
6 L A 0.7878
7 A A 0.4293
8 N A -0.4798
9 A A -0.6616
10 A A -1.4837
11 D A -1.5901
12 V A 0.5840
13 G A -0.1172
14 G A -0.4519
15 S A -0.0854
16 F A 0.5731
17 S A -0.5906
18 K A -1.7664
19 H A -0.7681
20 W A -0.6254
21 E A -2.0184
22 L A -0.9078
23 F A -0.9157
24 S A -1.8912
25 E A -2.4890
26 M A -2.1858
27 E A -3.0021
28 G A -2.7356
29 E A -3.1817
30 N A -3.2571
31 Q A -3.2696
32 M A -2.0614
33 K A -2.3487
34 L A -1.3926
35 A A -1.9686
36 N A -2.6162
37 R A -3.0429
38 S A -1.9329
39 S A -1.5103
40 E A -1.7439
41 V A -0.0858
42 E A -0.8771
43 Y A -0.4011
44 K A -1.6369
45 N A -2.0203
46 G A -1.4849
47 Q A -1.4043
48 E A -1.0253
49 Y A -0.2267
50 V A 0.0814
51 M A -0.4546
52 L A -0.7061
53 E A -2.2525
54 S A -1.4220
55 A A -1.2111
56 S A -1.6453
57 N A -1.6899
58 T A -0.9809
59 H A -0.9003
60 S A -0.8708
61 Y A -0.0995
62 K A -0.1769
63 L A 0.3086
64 D A 0.0000
65 V A 0.5922
66 W A -0.1201
67 R A -0.9321
68 Y A -0.9660
69 K A -2.2427
70 H A -1.5971
71 V A -0.5681
72 N A -1.2782
73 F A -0.8807
74 V A -0.0643
75 E A -0.6427
76 F A 0.1493
77 S A 0.3711
78 L A 0.7177
79 V A 1.1594
80 P A 0.3091
81 W A 0.3098
82 P A -0.3704
83 S A -0.5508
84 L A -0.7519
85 D A -1.6978
86 T A -1.0213
87 G A -0.9149
88 M A -0.2673
89 Q A -0.5868
90 V A 0.0000
91 A A 0.1966
92 A A 0.0172
93 T A -0.3255
94 M A -0.6199
95 R A -1.7533
96 M A -0.9963
97 S A -1.4584
98 A A -1.9270
99 E A -3.0036
100 R A -3.2345
101 G A -2.0726
102 N A -1.7924
103 V A -0.0141
104 A A -0.5524
105 K A -1.6467
106 G A -1.0006
107 Y A -0.7593
108 K A -1.9159
109 L A -0.9940
110 H A -1.2902
111 G A -0.7946
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Laboratory of Theory of Biopolymers 2018