| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGSGAANNPMGWFRQAPGKGRELVAAIGGAGSTSTYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAARGSSSVSSGGGVNKEYATDPSYYSFWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39)
[INFO] Main: Simulation completed successfully. (00:01:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0788 | |
| 2 | V | A | -1.2811 | |
| 3 | Q | A | -1.0980 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.0578 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.4436 | |
| 8 | G | A | -1.0861 | |
| 9 | G | A | -0.7557 | |
| 10 | G | A | -0.0574 | |
| 11 | L | A | 0.9145 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4977 | |
| 14 | P | A | -1.7553 | |
| 15 | G | A | -1.5041 | |
| 16 | G | A | -1.0128 | |
| 17 | S | A | -1.0151 | |
| 18 | L | A | -0.7585 | |
| 19 | R | A | -1.8317 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3027 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1814 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0423 | |
| 26 | G | A | -1.3735 | |
| 27 | S | A | -0.8432 | |
| 28 | G | A | -1.1190 | |
| 29 | A | A | 0.0000 | |
| 30 | A | A | -1.5671 | |
| 31 | N | A | -1.6072 | |
| 32 | N | A | 0.0000 | |
| 33 | P | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.7234 | |
| 40 | A | A | -1.6080 | |
| 41 | P | A | -1.1721 | |
| 42 | G | A | -1.6580 | |
| 43 | K | A | -2.7265 | |
| 44 | G | A | -2.3139 | |
| 45 | R | A | -2.3742 | |
| 46 | E | A | -2.4840 | |
| 47 | L | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | G | A | 0.0000 | |
| 54 | A | A | -1.0156 | |
| 55 | G | A | -0.8785 | |
| 56 | S | A | -0.5899 | |
| 57 | T | A | -0.3067 | |
| 58 | S | A | -0.3900 | |
| 59 | T | A | -0.3729 | |
| 60 | Y | A | -0.9138 | |
| 61 | Y | A | -1.3326 | |
| 62 | P | A | -1.8244 | |
| 63 | D | A | -2.5664 | |
| 64 | S | A | -1.8278 | |
| 65 | V | A | 0.0000 | |
| 66 | E | A | -2.6801 | |
| 67 | G | A | -1.7447 | |
| 68 | R | A | 0.0000 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.7892 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.4433 | |
| 73 | R | A | -1.1633 | |
| 74 | D | A | -1.8712 | |
| 75 | N | A | -2.1109 | |
| 76 | A | A | -1.6110 | |
| 77 | K | A | -2.6156 | |
| 78 | R | A | -2.5095 | |
| 79 | M | A | -1.2105 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | -0.5548 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.0911 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.2894 | |
| 86 | S | A | -1.2189 | |
| 87 | L | A | 0.0000 | |
| 88 | R | A | -2.6155 | |
| 89 | A | A | -1.8997 | |
| 90 | E | A | -2.3472 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -0.8955 | |
| 93 | A | A | 0.0000 | |
| 94 | V | A | -0.4293 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | -0.3025 | |
| 97 | C | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | R | A | 0.0000 | |
| 101 | G | A | -0.2943 | |
| 102 | S | A | -0.4307 | |
| 103 | S | A | -0.2022 | |
| 104 | S | A | 0.1353 | |
| 105 | V | A | 0.2369 | |
| 106 | S | A | -0.0070 | |
| 107 | S | A | -0.3775 | |
| 108 | G | A | -0.6279 | |
| 109 | G | A | 0.0000 | |
| 110 | G | A | -0.4908 | |
| 111 | V | A | -1.0286 | |
| 112 | N | A | -2.3522 | |
| 113 | K | A | -2.8793 | |
| 114 | E | A | -2.9044 | |
| 115 | Y | A | -1.5356 | |
| 116 | A | A | 0.0000 | |
| 117 | T | A | -1.6750 | |
| 118 | D | A | -1.5009 | |
| 119 | P | A | -0.7222 | |
| 120 | S | A | -0.2018 | |
| 121 | Y | A | 0.4365 | |
| 122 | Y | A | 0.0000 | |
| 123 | S | A | 0.1473 | |
| 124 | F | A | 0.1045 | |
| 125 | W | A | 0.2419 | |
| 126 | G | A | -0.0496 | |
| 127 | Q | A | -0.7421 | |
| 128 | G | A | -0.5357 | |
| 129 | T | A | -0.7091 | |
| 130 | Q | A | -0.9842 | |
| 131 | V | A | 0.0000 | |
| 132 | T | A | -0.3836 | |
| 133 | V | A | 0.0000 | |
| 134 | S | A | -0.8876 | |
| 135 | S | A | -0.7882 |