Project name: query_structure

Status: done

Started: 2026-03-16 23:24:33
Settings
Chain sequence(s) A: GIPCGESCVYIPCITAAIGCSCKSKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:15)
Show buried residues

Minimal score value
-1.8079
Maximal score value
2.2744
Average score
0.3624
Total score value
10.8727

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5624
2 I A 1.0132
3 P A 0.0710
4 C A 0.4958
5 G A -0.1457
6 E A 0.1338
7 S A 0.4498
8 C A 1.0641
9 V A 1.9916
10 Y A 2.2427
11 I A 1.8078
12 P A 1.2535
13 C A 1.4629
14 I A 2.2744
15 T A 1.4752
16 A A 1.2067
17 A A 1.4452
18 I A 2.0596
19 G A 0.4103
20 C A 0.0000
21 S A -0.5886
22 C A -0.4798
23 K A -1.8079
24 S A -1.2339
25 K A -1.0629
26 V A -0.6520
27 C A 0.0000
28 Y A -0.7488
29 R A -1.0862
30 N A -1.6167
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Laboratory of Theory of Biopolymers 2018