| Chain sequence(s) |
A: ATVRRERTGNMVIRAEGKDAATQVEVMNGTCTILATDMGSWCDDSIMYECVTIDSGEEPVDVDCFCKGVERVSLEYGRCGKPAGGRNRRSVSIPVHAHSDLTGRGHKWLKGDSVKTHLTRVEGWVWKNKFLTAAFCAVVWMVTDSLPTRFIVITVALCLAPTYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35)
[INFO] Main: Simulation completed successfully. (00:01:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.8568 | |
| 2 | T | A | -0.7167 | |
| 3 | V | A | -1.0983 | |
| 4 | R | A | -3.1416 | |
| 5 | R | A | -3.7232 | |
| 6 | E | A | -3.5585 | |
| 7 | R | A | -3.1482 | |
| 8 | T | A | -1.7944 | |
| 9 | G | A | -2.2456 | |
| 10 | N | A | -2.8936 | |
| 11 | M | A | 0.0000 | |
| 12 | V | A | 0.0000 | |
| 13 | I | A | 0.0000 | |
| 14 | R | A | -1.0888 | |
| 15 | A | A | 0.0000 | |
| 16 | E | A | -1.3452 | |
| 17 | G | A | -1.7244 | |
| 18 | K | A | -2.0035 | |
| 19 | D | A | -1.3576 | |
| 20 | A | A | -0.9643 | |
| 21 | A | A | -0.4700 | |
| 22 | T | A | -0.7444 | |
| 23 | Q | A | -1.5549 | |
| 24 | V | A | 0.0000 | |
| 25 | E | A | -2.1013 | |
| 26 | V | A | 0.0000 | |
| 27 | M | A | -0.0502 | |
| 28 | N | A | -1.3668 | |
| 29 | G | A | -1.5548 | |
| 30 | T | A | -1.5135 | |
| 31 | C | A | 0.0000 | |
| 32 | T | A | -0.9180 | |
| 33 | I | A | 0.0000 | |
| 34 | L | A | -0.3453 | |
| 35 | A | A | 0.0000 | |
| 36 | T | A | -0.5673 | |
| 37 | D | A | -1.3440 | |
| 38 | M | A | 0.0000 | |
| 39 | G | A | 0.0000 | |
| 40 | S | A | -0.8954 | |
| 41 | W | A | -0.4792 | |
| 42 | C | A | -0.8869 | |
| 43 | D | A | -2.0205 | |
| 44 | D | A | -1.6107 | |
| 45 | S | A | -0.7041 | |
| 46 | I | A | 0.3449 | |
| 47 | M | A | 0.6071 | |
| 48 | Y | A | -0.1875 | |
| 49 | E | A | -2.1551 | |
| 50 | C | A | 0.0000 | |
| 51 | V | A | -0.5380 | |
| 52 | T | A | -1.6581 | |
| 53 | I | A | 0.0000 | |
| 54 | D | A | -3.2296 | |
| 55 | S | A | -2.3753 | |
| 56 | G | A | -2.4374 | |
| 57 | E | A | -3.4720 | |
| 58 | E | A | -2.8676 | |
| 59 | P | A | -1.1924 | |
| 60 | V | A | 0.1094 | |
| 61 | D | A | -1.2114 | |
| 62 | V | A | -0.4241 | |
| 63 | D | A | -1.5087 | |
| 64 | C | A | 0.0000 | |
| 65 | F | A | 0.0000 | |
| 66 | C | A | 0.0000 | |
| 67 | K | A | -2.3015 | |
| 68 | G | A | -1.8063 | |
| 69 | V | A | 0.0000 | |
| 70 | E | A | -3.0772 | |
| 71 | R | A | -3.1119 | |
| 72 | V | A | 0.0000 | |
| 73 | S | A | 0.0000 | |
| 74 | L | A | 0.0000 | |
| 75 | E | A | -0.1895 | |
| 76 | Y | A | 0.0000 | |
| 77 | G | A | 0.0000 | |
| 78 | R | A | -1.6019 | |
| 79 | C | A | -1.2664 | |
| 80 | G | A | -1.2045 | |
| 81 | K | A | -2.2392 | |
| 82 | P | A | -1.1354 | |
| 83 | A | A | -1.0969 | |
| 84 | G | A | -1.5161 | |
| 85 | G | A | -2.4412 | |
| 86 | R | A | -3.5685 | |
| 87 | N | A | -3.7312 | |
| 88 | R | A | -3.6572 | |
| 89 | R | A | -3.0103 | |
| 90 | S | A | -0.7527 | |
| 91 | V | A | 1.3417 | |
| 92 | S | A | 1.5160 | |
| 93 | I | A | 2.6175 | |
| 94 | P | A | 1.4844 | |
| 95 | V | A | 1.5606 | |
| 96 | H | A | -0.2105 | |
| 97 | A | A | -0.7877 | |
| 98 | H | A | -1.4396 | |
| 99 | S | A | -1.2293 | |
| 100 | D | A | -1.5131 | |
| 101 | L | A | -0.0105 | |
| 102 | T | A | -0.6706 | |
| 103 | G | A | -1.2601 | |
| 104 | R | A | -2.5571 | |
| 105 | G | A | -2.1396 | |
| 106 | H | A | -2.1053 | |
| 107 | K | A | -1.9498 | |
| 108 | W | A | 0.3385 | |
| 109 | L | A | 0.7432 | |
| 110 | K | A | -1.4743 | |
| 111 | G | A | -1.4659 | |
| 112 | D | A | -2.2467 | |
| 113 | S | A | -0.8571 | |
| 114 | V | A | 0.1014 | |
| 115 | K | A | -1.9080 | |
| 116 | T | A | -1.3355 | |
| 117 | H | A | -1.1635 | |
| 118 | L | A | -0.7878 | |
| 119 | T | A | -1.5687 | |
| 120 | R | A | -2.2646 | |
| 121 | V | A | 0.0000 | |
| 122 | E | A | -2.0944 | |
| 123 | G | A | -1.7007 | |
| 124 | W | A | -1.1960 | |
| 125 | V | A | -0.3517 | |
| 126 | W | A | -0.3781 | |
| 127 | K | A | -1.3309 | |
| 128 | N | A | -0.1545 | |
| 129 | K | A | 0.0197 | |
| 130 | F | A | 1.9122 | |
| 131 | L | A | 1.7037 | |
| 132 | T | A | 1.3375 | |
| 133 | A | A | 1.3047 | |
| 134 | A | A | 1.7070 | |
| 135 | F | A | 2.0719 | |
| 136 | C | A | 2.2414 | |
| 137 | A | A | 2.0679 | |
| 138 | V | A | 2.8851 | |
| 139 | V | A | 0.0000 | |
| 140 | W | A | 2.7624 | |
| 141 | M | A | 2.5429 | |
| 142 | V | A | 2.4791 | |
| 143 | T | A | 1.0972 | |
| 144 | D | A | -0.9482 | |
| 145 | S | A | -0.1254 | |
| 146 | L | A | 1.1007 | |
| 147 | P | A | 1.1047 | |
| 148 | T | A | 1.3525 | |
| 149 | R | A | 2.1953 | |
| 150 | F | A | 3.5703 | |
| 151 | I | A | 3.7226 | |
| 152 | V | A | 2.9913 | |
| 153 | I | A | 2.6434 | |
| 154 | T | A | 2.3601 | |
| 155 | V | A | 2.7432 | |
| 156 | A | A | 2.0041 | |
| 157 | L | A | 1.2493 | |
| 158 | C | A | 0.9872 | |
| 159 | L | A | 1.6227 | |
| 160 | A | A | 1.0310 | |
| 161 | P | A | 0.0000 | |
| 162 | T | A | 0.6672 | |
| 163 | Y | A | 1.4870 | |
| 164 | A | A | 0.7908 |