Project name: 56be3be269f6869 [mutate: TD30A]

Status: done

Started: 2025-11-12 06:11:01
Settings
Chain sequence(s) A: QVQLVQSGSELKKPGASSVKVSCKASGYTFTQNNMDWVRQAPGQGLEWMGDINTRSGGVVIIYYNEEFQDRLIMMTVDKSSTDTAYMMELSSLRSSEDTATYHCARRKSYGYYLDVWGEGTLVTVSSASTTKGPSVFPLAPCSRTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVDHKPSNNTKVDKRVES
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues TD30A
Energy difference between WT (input) and mutated protein (by FoldX) -0.00535891 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:02:33)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:43)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:09)
Show buried residues

Minimal score value
-3.3463
Maximal score value
2.4575
Average score
-0.5715
Total score value
-124.5837

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.4336
2 V A -0.5933
3 Q A -1.0181
4 L A 0.0000
5 V A 0.6742
6 Q A -0.2013
7 S A -0.7369
8 G A -0.9165
9 S A -1.1905
10 E A -1.6127
11 L A -1.0078
12 K A -1.5782
13 K A -2.3811
14 P A -2.1475
15 G A -1.5259
16 A A -1.1836
17 S A -1.2653
18 V A 0.0000
19 K A -1.8117
20 V A 0.0000
21 S A -0.5216
22 C A 0.0000
23 K A -1.0762
24 A A 0.0000
25 S A -0.8589
26 G A -0.9266
27 Y A -0.6141
28 T A -0.6378
29 F A 0.0000
30 D A -2.2698 mutated: TD30A
31 Q A -1.4707
32 N A 0.0000
33 N A -0.8886
34 M A 0.0000
35 D A 0.0000
36 W A 0.0000
37 V A 0.0000
38 R A -0.3320
39 Q A -0.7337
40 A A -1.1206
41 P A -1.0509
42 G A -1.1974
43 Q A -1.6216
44 G A -0.7010
45 L A 0.5837
46 E A -0.1121
47 W A 0.3215
48 M A 0.0000
49 G A 0.0000
50 D A 0.0000
51 I A 0.0000
52 N A -1.0994
53 T A 0.0000
54 R A -2.7084
55 S A -1.5294
56 G A -1.2740
57 G A -0.3248
58 V A 1.0123
59 I A 1.5471
60 Y A 0.0108
61 N A -1.3051
62 E A -3.1252
63 E A -3.3463
64 F A 0.0000
65 Q A -2.4464
66 D A -2.7068
67 R A 0.0000
68 L A 0.0000
69 I A 0.8668
70 M A 0.0000
71 T A 0.0068
72 V A -1.2562
73 D A -2.0414
74 K A -2.8710
75 S A -1.4899
76 T A -1.4868
77 D A -2.1251
78 T A -1.2938
79 A A 0.0000
80 Y A -0.3043
81 M A 0.0000
82 E A -0.7153
83 L A 0.0000
84 S A -0.8742
85 S A -1.2252
86 L A 0.0000
87 R A -2.6101
88 S A -2.1862
89 E A -2.3981
90 D A 0.0000
91 T A -1.0321
92 A A 0.0000
93 T A -0.3248
94 Y A 0.0000
95 H A -0.2871
96 C A 0.0000
97 A A 0.0000
98 R A -0.2152
99 R A 0.0053
100 K A -0.0051
101 S A 0.1328
102 Y A 1.3326
103 G A 1.1655
104 Y A 1.8543
105 Y A 1.7375
106 L A 0.6045
107 D A -0.3362
108 V A -0.1194
109 W A 0.0333
110 G A 0.0000
111 E A -1.5233
112 G A -0.8452
113 T A 0.0000
114 L A -0.4569
115 V A 0.0000
116 T A -0.9565
117 V A 0.0000
118 S A -1.3635
119 S A -0.9376
120 A A -0.5903
121 S A -0.6729
122 T A -0.8697
123 K A -1.3161
124 G A -1.5681
125 P A 0.0000
126 S A -0.3313
127 V A 0.0000
128 F A 0.7768
129 P A 0.2397
130 L A 0.9317
131 A A 0.2801
132 P A -0.2206
133 C A 0.1785
134 S A -0.7874
135 R A -2.0429
137 T A -1.2256
138 S A -1.4806
139 E A -2.3411
140 S A -1.3220
141 T A -0.9284
142 A A -0.7389
143 A A 0.1141
144 L A 0.0000
145 G A 0.0000
146 C A 0.0000
147 L A 0.6553
148 V A 0.0000
149 K A -0.3154
150 D A -0.5238
151 Y A 0.0000
152 F A -0.2423
153 P A 0.0000
154 E A -0.4343
155 P A -0.6993
156 V A -0.5753
157 T A -0.4995
158 V A -0.1325
159 S A -0.5400
160 W A 0.0000
161 N A -1.0609
162 S A -0.7571
163 G A -0.5371
164 A A -0.2403
165 L A -0.0755
166 T A -0.2809
167 S A -0.3268
168 G A -0.4030
169 V A 0.0042
170 H A -0.5116
171 T A 0.2039
172 F A 1.0784
173 P A 0.7793
174 A A 1.3274
175 V A 2.4575
176 L A 2.1013
177 Q A 0.6110
178 S A 0.0099
179 S A -0.2903
180 G A -0.0512
181 L A 0.2448
182 Y A 0.8103
183 S A 0.7215
184 L A 0.0000
185 S A 0.6677
186 S A 0.0000
187 V A 0.3851
188 V A 0.0000
189 T A -0.2258
190 V A 0.0000
191 P A -0.6513
192 S A -0.7606
193 S A -0.6523
194 S A -0.4059
195 L A -0.3363
196 G A -0.6973
197 T A -0.6270
198 Q A -0.8916
199 T A -0.9987
200 Y A 0.0000
201 T A -1.7822
202 C A 0.0000
203 N A -1.6864
204 V A 0.0000
205 D A -1.8062
206 H A 0.0000
207 K A -2.8962
208 P A -1.8436
209 S A -1.9248
210 N A -2.6858
211 T A -2.0881
212 K A -2.6550
213 V A -1.6028
214 D A -2.8249
215 K A -2.2156
216 R A -2.6121
217 V A -1.1383
218 E A -1.1997
219 S A -1.0258
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Laboratory of Theory of Biopolymers 2018