| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFSDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEYQHPTADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRNGPDGHPLPDDPPPSPLYVRPPPDSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8898 | |
| 2 | L | A | 1.8159 | |
| 3 | P | A | 0.5296 | |
| 4 | P | A | 0.1718 | |
| 5 | T | A | -0.0430 | |
| 6 | T | A | -0.0617 | |
| 7 | P | A | 0.2698 | |
| 8 | V | A | 1.2012 | |
| 9 | A | A | -0.0306 | |
| 10 | K | A | -1.1277 | |
| 11 | V | A | -0.4032 | |
| 12 | Q | A | -1.5292 | |
| 13 | S | A | -1.6030 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4247 | |
| 16 | E | A | -2.4438 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4620 | |
| 20 | P | A | 0.1316 | |
| 21 | T | A | 0.1665 | |
| 22 | S | A | -0.0933 | |
| 23 | L | A | 0.1021 | |
| 24 | F | A | -0.0141 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1323 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.5967 | |
| 31 | R | A | -2.5301 | |
| 32 | L | A | -0.6971 | |
| 33 | L | A | 1.1981 | |
| 34 | T | A | 1.3504 | |
| 35 | V | A | 1.7779 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.1796 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1309 | |
| 40 | S | A | -0.2979 | |
| 41 | D | A | 0.0172 | |
| 42 | I | A | 1.7743 | |
| 43 | V | A | 2.4623 | |
| 44 | V | A | 1.6857 | |
| 45 | N | A | -0.5183 | |
| 46 | G | A | -0.3409 | |
| 47 | K | A | -0.1125 | |
| 48 | V | A | 2.2174 | |
| 49 | L | A | 2.5581 | |
| 50 | V | A | 1.6932 | |
| 51 | P | A | 0.6552 | |
| 52 | K | A | -0.1292 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1242 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4854 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2772 | |
| 70 | K | A | -1.8155 | |
| 71 | F | A | -0.6687 | |
| 72 | A | A | -0.5721 | |
| 73 | L | A | -0.8453 | |
| 74 | P | A | -1.2492 | |
| 75 | Q | A | -2.4822 | |
| 76 | K | A | -3.0975 | |
| 77 | D | A | -2.9958 | |
| 78 | F | A | -1.6476 | |
| 79 | Y | A | -1.9318 | |
| 80 | D | A | -2.7770 | |
| 81 | P | A | -2.4286 | |
| 82 | E | A | -3.0874 | |
| 83 | K | A | -3.4578 | |
| 84 | E | A | -2.5217 | |
| 85 | R | A | -1.3325 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6346 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9677 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3257 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6747 | |
| 99 | G | A | -0.5361 | |
| 100 | P | A | -0.4284 | |
| 101 | L | A | -0.0113 | |
| 102 | G | A | -0.3552 | |
| 103 | K | A | -0.9444 | |
| 104 | G | A | -0.6435 | |
| 105 | S | A | -0.6113 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1172 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4143 | |
| 110 | L | A | 0.3182 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1692 | |
| 113 | K | A | -0.4751 | |
| 114 | L | A | -1.0343 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3733 | |
| 117 | T | A | -1.0263 | |
| 118 | E | A | -1.9259 | |
| 119 | N | A | -2.2523 | |
| 120 | P | A | -1.9549 | |
| 121 | T | A | -1.5993 | |
| 122 | E | A | -2.2249 | |
| 123 | Y | A | -0.7854 | |
| 124 | Q | A | -1.0671 | |
| 125 | H | A | -0.8271 | |
| 126 | P | A | -1.1662 | |
| 127 | T | A | -1.1403 | |
| 128 | A | A | -1.0981 | |
| 129 | D | A | -2.1303 | |
| 130 | D | A | -1.6255 | |
| 131 | R | A | -1.0984 | |
| 132 | V | A | 0.2403 | |
| 133 | A | A | 0.4397 | |
| 134 | F | A | 0.2814 | |
| 135 | S | A | -0.1042 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8297 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2297 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5622 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2492 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1452 | |
| 157 | D | A | 0.3363 | |
| 158 | L | A | 0.8438 | |
| 159 | A | A | 0.1908 | |
| 160 | E | A | -1.4473 | |
| 161 | P | A | -0.2575 | |
| 162 | C | A | 0.1469 | |
| 163 | P | A | -0.2033 | |
| 164 | G | A | -0.1290 | |
| 165 | L | A | 0.4799 | |
| 166 | P | A | -0.1650 | |
| 167 | P | A | -0.3676 | |
| 168 | G | A | -0.4336 | |
| 169 | A | A | -0.0485 | |
| 170 | C | A | 0.6503 | |
| 171 | P | A | 0.5148 | |
| 172 | P | A | 0.7055 | |
| 173 | I | A | 2.0162 | |
| 174 | Q | A | 0.8607 | |
| 175 | L | A | 1.4938 | |
| 176 | V | A | 0.8399 | |
| 177 | N | A | -0.3444 | |
| 178 | S | A | 0.0088 | |
| 179 | V | A | 0.3925 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3644 | |
| 182 | D | A | 0.0727 | |
| 183 | G | A | -0.1598 | |
| 184 | D | A | -0.5652 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1356 | |
| 190 | F | A | 0.0582 | |
| 191 | G | A | -0.1033 | |
| 192 | N | A | -0.2786 | |
| 193 | M | A | -0.1356 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4220 | |
| 197 | E | A | -2.5929 | |
| 198 | L | A | -1.2121 | |
| 199 | Q | A | -2.5507 | |
| 200 | Q | A | -3.3529 | |
| 201 | D | A | -3.6113 | |
| 202 | R | A | -3.3501 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4252 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4015 | |
| 211 | S | A | -1.7554 | |
| 212 | T | A | -1.4672 | |
| 213 | R | A | -2.1472 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1776 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2894 | |
| 220 | L | A | 0.4902 | |
| 221 | K | A | -1.3294 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9738 | |
| 224 | N | A | -1.5875 | |
| 225 | E | A | -1.3418 | |
| 226 | A | A | -0.6801 | |
| 227 | Y | A | -0.4689 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7068 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1345 | |
| 234 | F | A | 0.0316 | |
| 235 | G | A | -0.9164 | |
| 236 | R | A | -2.6640 | |
| 237 | R | A | -2.9290 | |
| 238 | E | A | -2.1355 | |
| 239 | Q | A | -0.1344 | |
| 240 | V | A | 1.5492 | |
| 241 | Y | A | 1.2325 | |
| 242 | A | A | 0.1482 | |
| 243 | R | A | -1.3263 | |
| 244 | H | A | -1.0398 | |
| 245 | F | A | 0.0878 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7297 | |
| 249 | N | A | -1.2231 | |
| 250 | G | A | -1.0083 | |
| 251 | P | A | -1.0294 | |
| 252 | D | A | -1.3495 | |
| 253 | G | A | -1.2842 | |
| 254 | H | A | -1.4032 | |
| 255 | P | A | -0.7723 | |
| 256 | L | A | -0.0200 | |
| 257 | P | A | -0.7520 | |
| 258 | D | A | -1.3052 | |
| 259 | D | A | -2.3173 | |
| 260 | P | A | -1.7149 | |
| 261 | P | A | -1.3174 | |
| 262 | P | A | -0.6578 | |
| 263 | S | A | -0.2799 | |
| 264 | P | A | 0.4515 | |
| 265 | L | A | 1.6592 | |
| 266 | Y | A | 1.2700 | |
| 267 | V | A | 1.1155 | |
| 268 | R | A | -0.6233 | |
| 269 | P | A | -0.3055 | |
| 270 | P | A | -1.0123 | |
| 271 | P | A | -1.1473 | |
| 272 | D | A | -1.7154 | |
| 273 | S | A | -0.5600 | |
| 274 | P | A | 0.1565 | |
| 275 | Y | A | 1.0527 | |
| 276 | A | A | 0.6684 | |
| 277 | V | A | 2.0629 | |
| 278 | L | A | 1.6568 | |
| 279 | P | A | 0.4626 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.0175 | |
| 282 | D | A | -0.6687 | |
| 283 | Y | A | 0.9940 | |
| 284 | F | A | 0.7928 | |
| 285 | G | A | 0.2213 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8906 | |
| 291 | L | A | 1.5842 | |
| 292 | V | A | 0.5695 | |
| 293 | S | A | -0.1600 | |
| 294 | S | A | -0.9704 | |
| 295 | D | A | -1.8445 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1268 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6514 | |
| 301 | R | A | -1.8925 | |
| 302 | P | A | -0.9674 | |
| 303 | F | A | -0.1873 | |
| 304 | W | A | -0.5177 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0813 | |
| 307 | R | A | -2.9242 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6565 | |
| 310 | G | A | -1.4248 | |
| 311 | N | A | -1.4031 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9377 | |
| 319 | N | A | -0.8940 | |
| 320 | E | A | -1.0559 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4131 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1957 | |
| 333 | N | A | 0.4854 | |
| 334 | F | A | 1.7563 | |
| 335 | T | A | 0.9026 | |
| 336 | I | A | 0.5135 | |
| 337 | S | A | -0.9237 | |
| 338 | Q | A | -1.6959 | |
| 339 | Q | A | -1.0761 | |
| 340 | L | A | 0.7747 | |
| 341 | C | A | 0.7091 | |
| 342 | T | A | 0.5581 | |
| 343 | P | A | 0.4037 | |
| 344 | L | A | 1.5165 | |
| 345 | P | A | 0.6580 | |
| 346 | N | A | 0.1019 | |
| 347 | V | A | 1.7598 | |
| 348 | Y | A | 1.6381 | |
| 349 | D | A | 0.2179 | |
| 350 | P | A | -0.4168 | |
| 351 | S | A | -0.3563 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.6567 | |
| 354 | K | A | -1.8411 | |
| 355 | N | A | -1.7654 | |
| 356 | Y | A | -0.0453 | |
| 357 | L | A | 0.6620 | |
| 358 | R | A | 0.9601 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3499 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0304 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8861 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6543 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2807 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3514 | |
| 376 | L | A | -1.8090 | |
| 377 | D | A | -2.0907 | |
| 378 | P | A | -0.9241 | |
| 379 | G | A | -0.9097 | |
| 380 | V | A | -0.9416 | |
| 381 | L | A | -0.2905 | |
| 382 | A | A | -0.0304 | |
| 383 | H | A | -0.5977 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.4483 | |
| 386 | T | A | -0.0456 | |
| 387 | M | A | -0.1504 | |
| 388 | N | A | -0.6733 | |
| 389 | P | A | -1.0408 | |
| 390 | T | A | -1.4831 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4980 | |
| 393 | E | A | -2.9627 | |
| 394 | N | A | -2.7951 | |
| 395 | W | A | -1.6596 | |
| 396 | N | A | -1.4469 | |
| 397 | L | A | -0.3431 | |
| 398 | G | A | 0.4361 | |
| 399 | F | A | 2.3848 | |
| 400 | V | A | 1.8201 | |
| 401 | P | A | 0.0294 | |
| 402 | P | A | -1.9425 | |
| 403 | K | A | -3.4524 | |
| 404 | E | A | -3.9357 | |
| 405 | R | A | -4.3003 | |
| 406 | E | A | -3.9369 | |
| 407 | D | A | -2.9231 | |
| 408 | P | A | -1.7948 | |
| 409 | Y | A | -0.9889 | |
| 410 | K | A | -2.0991 | |
| 411 | G | A | -0.6434 | |
| 412 | L | A | 0.6557 | |
| 413 | I | A | 1.5802 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3930 | |
| 416 | E | A | -1.6630 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8523 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9127 | |
| 421 | E | A | -2.5343 | |
| 422 | R | A | -2.1224 | |
| 423 | F | A | -1.0561 | |
| 424 | S | A | -1.3407 | |
| 425 | Q | A | -1.8314 | |
| 426 | D | A | -2.8810 | |
| 427 | L | A | -1.9661 | |
| 428 | D | A | -2.7298 | |
| 429 | Q | A | -2.5901 | |
| 430 | F | A | -1.4198 | |
| 431 | A | A | -0.8736 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5102 | |
| 435 | K | A | -0.6787 | |
| 436 | F | A | 0.1828 | |
| 437 | L | A | 1.0611 | |
| 438 | Y | A | 0.8510 | |
| 439 | Q | A | -0.2557 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine