| Chain sequence(s) |
A: DIQMTQSPSSVSASVGDRVTITCRASQGINTWLAWYQQKPGKAPKLLIYAASSLKSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTKVEIKGGGGSGGGGSGGGGSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGFSWVRQAPGQGLEWMGWISASNGNTYYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARVYADYADYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:13)
[INFO] Main: Simulation completed successfully. (00:02:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.1587 | |
| 2 | I | A | -1.6135 | |
| 3 | Q | A | -2.1712 | |
| 4 | M | A | 0.0000 | |
| 5 | T | A | -1.3271 | |
| 6 | Q | A | -0.9113 | |
| 7 | S | A | -0.7406 | |
| 8 | P | A | -0.5910 | |
| 9 | S | A | -0.7768 | |
| 10 | S | A | -0.8960 | |
| 11 | V | A | -0.6634 | |
| 12 | S | A | -1.1365 | |
| 13 | A | A | 0.0000 | |
| 14 | S | A | -0.9727 | |
| 15 | V | A | -0.0162 | |
| 16 | G | A | -0.7437 | |
| 17 | D | A | -1.5815 | |
| 18 | R | A | -2.2426 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.6193 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.8682 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -2.7921 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -1.9995 | |
| 27 | Q | A | -2.4660 | |
| 28 | G | A | -1.8819 | |
| 29 | I | A | 0.0000 | |
| 30 | N | A | -1.7762 | |
| 31 | T | A | -0.8028 | |
| 32 | W | A | -0.0982 | |
| 33 | L | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | Q | A | 0.0000 | |
| 38 | Q | A | 0.0000 | |
| 39 | K | A | -1.8324 | |
| 40 | P | A | -1.2472 | |
| 41 | G | A | -1.6925 | |
| 42 | K | A | -2.6466 | |
| 43 | A | A | -1.6262 | |
| 44 | P | A | 0.0000 | |
| 45 | K | A | -1.3251 | |
| 46 | L | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | 0.3636 | |
| 50 | A | A | 0.0671 | |
| 51 | A | A | 0.0000 | |
| 52 | S | A | -0.2787 | |
| 53 | S | A | 0.0422 | |
| 54 | L | A | 0.2300 | |
| 55 | K | A | -0.3260 | |
| 56 | S | A | -0.4269 | |
| 57 | G | A | -0.5336 | |
| 58 | V | A | -0.3476 | |
| 59 | P | A | -0.3743 | |
| 60 | S | A | -0.4462 | |
| 61 | R | A | -0.7719 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.3187 | |
| 64 | G | A | -0.2662 | |
| 65 | S | A | -0.6704 | |
| 66 | G | A | -1.2128 | |
| 67 | S | A | -1.3457 | |
| 68 | G | A | -1.6753 | |
| 69 | T | A | -1.9891 | |
| 70 | D | A | -2.1598 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.7544 | |
| 73 | L | A | 0.0000 | |
| 74 | T | A | -0.6055 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -1.2942 | |
| 77 | S | A | -1.1069 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -0.7361 | |
| 80 | P | A | -1.3206 | |
| 81 | E | A | -1.9499 | |
| 82 | D | A | 0.0000 | |
| 83 | F | A | -0.6054 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -0.8097 | |
| 86 | Y | A | 0.0000 | |
| 87 | Y | A | 0.0000 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | Q | A | 0.0000 | |
| 91 | A | A | -0.0645 | |
| 92 | N | A | -0.7703 | |
| 93 | S | A | -0.1868 | |
| 94 | F | A | 0.7204 | |
| 95 | P | A | 0.0983 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | -0.5407 | |
| 98 | F | A | -0.2453 | |
| 99 | G | A | 0.0000 | |
| 100 | G | A | -1.0895 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -1.5040 | |
| 104 | V | A | 0.0000 | |
| 105 | E | A | -1.5100 | |
| 106 | I | A | -1.3366 | |
| 107 | K | A | -2.0491 | |
| 108 | G | A | -1.5959 | |
| 109 | G | A | -1.5005 | |
| 110 | G | A | -1.3269 | |
| 111 | G | A | -1.4214 | |
| 112 | S | A | -1.2433 | |
| 113 | G | A | -1.6036 | |
| 114 | G | A | -1.4566 | |
| 115 | G | A | -1.4391 | |
| 116 | G | A | -1.3842 | |
| 117 | S | A | -1.0432 | |
| 118 | G | A | -1.1685 | |
| 119 | G | A | -1.3306 | |
| 120 | G | A | -1.3087 | |
| 121 | G | A | -1.3724 | |
| 122 | S | A | -1.3890 | |
| 123 | Q | A | -1.8473 | |
| 124 | V | A | -1.0620 | |
| 125 | Q | A | -1.2415 | |
| 126 | L | A | 0.0000 | |
| 127 | V | A | 0.1699 | |
| 128 | Q | A | 0.0000 | |
| 129 | S | A | -0.5739 | |
| 130 | G | A | -0.5536 | |
| 131 | A | A | 0.1105 | |
| 132 | E | A | -0.3698 | |
| 133 | V | A | 0.7735 | |
| 134 | K | A | -1.0906 | |
| 135 | K | A | -2.1794 | |
| 136 | P | A | -2.3214 | |
| 137 | G | A | -1.7282 | |
| 138 | A | A | -1.4343 | |
| 139 | S | A | -1.6231 | |
| 140 | V | A | 0.0000 | |
| 141 | K | A | -1.9882 | |
| 142 | V | A | 0.0000 | |
| 143 | S | A | -0.4828 | |
| 144 | C | A | 0.0000 | |
| 145 | K | A | -0.8952 | |
| 146 | A | A | 0.0000 | |
| 147 | S | A | -0.8449 | |
| 148 | G | A | -0.9585 | |
| 149 | Y | A | -0.3154 | |
| 150 | T | A | -0.0951 | |
| 151 | F | A | 0.0000 | |
| 152 | T | A | -0.4497 | |
| 153 | S | A | 0.0516 | |
| 154 | Y | A | 0.5031 | |
| 155 | G | A | 0.0000 | |
| 156 | F | A | 0.0000 | |
| 157 | S | A | 0.0000 | |
| 158 | W | A | 0.0000 | |
| 159 | V | A | 0.0000 | |
| 160 | R | A | 0.0000 | |
| 161 | Q | A | -0.5039 | |
| 162 | A | A | -0.8893 | |
| 163 | P | A | -1.0365 | |
| 164 | G | A | -1.2220 | |
| 165 | Q | A | -1.7522 | |
| 166 | G | A | -1.1268 | |
| 167 | L | A | 0.0000 | |
| 168 | E | A | -0.6413 | |
| 169 | W | A | 0.0000 | |
| 170 | M | A | 0.0000 | |
| 171 | G | A | 0.0000 | |
| 172 | W | A | 0.4303 | |
| 173 | I | A | 0.0000 | |
| 174 | S | A | 0.0000 | |
| 175 | A | A | 0.0000 | |
| 176 | S | A | -1.1435 | |
| 177 | N | A | -1.9341 | |
| 178 | G | A | -1.6862 | |
| 179 | N | A | -1.6522 | |
| 180 | T | A | -0.3190 | |
| 181 | Y | A | 0.7705 | |
| 182 | Y | A | -0.1098 | |
| 183 | A | A | 0.0000 | |
| 184 | Q | A | -2.5207 | |
| 185 | K | A | -2.6880 | |
| 186 | L | A | 0.0000 | |
| 187 | Q | A | -2.2653 | |
| 188 | G | A | -1.7270 | |
| 189 | R | A | -1.5485 | |
| 190 | V | A | 0.0000 | |
| 191 | T | A | -0.7111 | |
| 192 | M | A | 0.0000 | |
| 193 | T | A | -0.3162 | |
| 194 | T | A | -0.6700 | |
| 195 | D | A | -0.8736 | |
| 196 | T | A | -0.5736 | |
| 197 | S | A | -0.4887 | |
| 198 | T | A | -0.6197 | |
| 199 | S | A | -0.6694 | |
| 200 | T | A | 0.0000 | |
| 201 | A | A | 0.0000 | |
| 202 | Y | A | -0.3539 | |
| 203 | M | A | 0.0000 | |
| 204 | E | A | -1.1618 | |
| 205 | L | A | 0.0000 | |
| 206 | R | A | -1.8738 | |
| 207 | S | A | -1.6266 | |
| 208 | L | A | 0.0000 | |
| 209 | R | A | -3.1266 | |
| 210 | S | A | -2.3821 | |
| 211 | D | A | -2.5262 | |
| 212 | D | A | 0.0000 | |
| 213 | T | A | -0.7297 | |
| 214 | A | A | 0.0000 | |
| 215 | V | A | 0.5772 | |
| 216 | Y | A | 0.0000 | |
| 217 | Y | A | 0.0000 | |
| 218 | C | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | R | A | 0.0000 | |
| 221 | V | A | 0.0000 | |
| 222 | Y | A | 1.3696 | |
| 223 | A | A | 0.6882 | |
| 224 | D | A | 0.3390 | |
| 225 | Y | A | 0.6151 | |
| 226 | A | A | 0.0000 | |
| 227 | D | A | 0.0437 | |
| 228 | Y | A | -0.1094 | |
| 229 | W | A | -0.4721 | |
| 230 | G | A | 0.0000 | |
| 231 | Q | A | -1.3530 | |
| 232 | G | A | -0.5147 | |
| 233 | T | A | 0.0000 | |
| 234 | L | A | 0.9167 | |
| 235 | V | A | 0.0000 | |
| 236 | T | A | -0.1843 | |
| 237 | V | A | 0.0000 | |
| 238 | S | A | -1.0789 | |
| 239 | S | A | -0.7847 |