| Chain sequence(s) |
A: LKHSISDYTEAEFLQLVTTICNADTSSEEELVKLVTHFEEMTEHPSGSALIYYPKEGDDDSPSGIVNTVKQWRAANGKSGFKQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | EA30A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.731505 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] FoldX: Building mutant model (00:00:45)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:55)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | L | A | 0.2788 | |
| 4 | K | A | -1.7039 | |
| 5 | H | A | -1.7884 | |
| 6 | S | A | -1.5942 | |
| 7 | I | A | 0.0000 | |
| 8 | S | A | -1.3875 | |
| 9 | D | A | -1.4522 | |
| 10 | Y | A | -1.4815 | |
| 11 | T | A | -1.9662 | |
| 12 | E | A | -2.5581 | |
| 13 | A | A | -1.5584 | |
| 14 | E | A | -2.1012 | |
| 15 | F | A | 0.0000 | |
| 16 | L | A | -1.1027 | |
| 17 | Q | A | -1.5921 | |
| 18 | L | A | -0.6343 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.9911 | |
| 21 | T | A | -1.1107 | |
| 22 | I | A | 0.0000 | |
| 23 | C | A | -0.7045 | |
| 24 | N | A | -1.7240 | |
| 25 | A | A | -1.2164 | |
| 26 | D | A | -2.2932 | |
| 27 | T | A | -1.3962 | |
| 28 | S | A | -1.0596 | |
| 29 | S | A | -1.0122 | |
| 30 | A | A | -1.0326 | mutated: EA30A |
| 31 | E | A | -1.9958 | |
| 32 | E | A | -1.9090 | |
| 33 | L | A | -0.7735 | |
| 34 | V | A | 0.3119 | |
| 35 | K | A | -1.3907 | |
| 36 | L | A | -0.5475 | |
| 37 | V | A | -0.2872 | |
| 38 | T | A | -0.7470 | |
| 39 | H | A | -1.4048 | |
| 40 | F | A | 0.0000 | |
| 41 | E | A | -2.2585 | |
| 42 | E | A | -2.9423 | |
| 43 | M | A | 0.0000 | |
| 44 | T | A | 0.0000 | |
| 45 | E | A | -2.8400 | |
| 46 | H | A | -1.6435 | |
| 47 | P | A | -0.9022 | |
| 48 | S | A | -0.6463 | |
| 49 | G | A | -0.8874 | |
| 50 | S | A | 0.2978 | |
| 51 | A | A | 0.3491 | |
| 52 | L | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | Y | A | 0.9350 | |
| 55 | Y | A | 0.6716 | |
| 56 | P | A | -1.5905 | |
| 57 | K | A | -3.0535 | |
| 58 | E | A | -3.1987 | |
| 59 | G | A | -2.8206 | |
| 60 | D | A | -3.3754 | |
| 61 | D | A | -3.7668 | |
| 62 | D | A | -2.8494 | |
| 63 | S | A | -1.6764 | |
| 64 | P | A | -1.1908 | |
| 65 | S | A | -1.1653 | |
| 66 | G | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | V | A | 0.0000 | |
| 69 | N | A | -2.5071 | |
| 70 | T | A | -1.8982 | |
| 71 | V | A | 0.0000 | |
| 72 | K | A | -2.4738 | |
| 73 | Q | A | -2.1115 | |
| 74 | W | A | -1.5006 | |
| 75 | R | A | 0.0000 | |
| 76 | A | A | -1.3110 | |
| 77 | A | A | -0.9733 | |
| 78 | N | A | -1.3440 | |
| 79 | G | A | -1.2981 | |
| 80 | K | A | -1.8550 | |
| 81 | S | A | -1.2708 | |
| 82 | G | A | -1.6880 | |
| 83 | F | A | -1.5864 | |
| 84 | K | A | -2.1636 | |
| 85 | Q | A | -1.9773 |