| Chain sequence(s) |
A: NFMLTQPHSVSESPGKTVTISCARSSGSIASNYVQWFQQRPGSAPTTVVYEDHQRPSGVPDRFSGSIDSSSNSASLTISGLTADDEADYYCQSYDDSNYYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATVLCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.2139 | |
| 2 | F | A | 0.0000 | |
| 3 | M | A | 0.8224 | |
| 4 | L | A | 0.0000 | |
| 5 | T | A | 0.1743 | |
| 6 | Q | A | 0.0000 | |
| 7 | P | A | -0.6671 | |
| 8 | H | A | -1.1599 | |
| 9 | S | A | -0.8625 | |
| 10 | V | A | -0.4422 | |
| 11 | S | A | -0.6947 | |
| 12 | E | A | -1.0937 | |
| 13 | S | A | -1.0510 | |
| 14 | P | A | -1.0934 | |
| 15 | G | A | -1.4184 | |
| 16 | K | A | -1.9252 | |
| 17 | T | A | -1.1756 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.1793 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.2631 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.3100 | |
| 24 | R | A | -0.3204 | |
| 25 | S | A | -0.3853 | |
| 26 | S | A | -0.6662 | |
| 27 | G | A | -1.0028 | |
| 28 | S | A | -0.8711 | |
| 29 | I | A | 0.0000 | |
| 30 | A | A | -0.2378 | |
| 31 | S | A | -0.4793 | |
| 32 | N | A | -0.4944 | |
| 33 | Y | A | 0.4908 | |
| 34 | V | A | 0.0000 | |
| 35 | Q | A | -0.2093 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.1966 | |
| 38 | Q | A | 0.0000 | |
| 39 | Q | A | -1.1436 | |
| 40 | R | A | -1.6881 | |
| 41 | P | A | -1.1218 | |
| 42 | G | A | -0.8701 | |
| 43 | S | A | -0.7195 | |
| 44 | A | A | -0.4140 | |
| 45 | P | A | -0.5223 | |
| 46 | T | A | -0.1861 | |
| 47 | T | A | -0.0089 | |
| 48 | V | A | 0.0000 | |
| 49 | V | A | 0.0000 | |
| 50 | Y | A | -0.8623 | |
| 51 | E | A | -1.4701 | |
| 52 | D | A | -1.2061 | |
| 53 | H | A | -1.8020 | |
| 54 | Q | A | -2.0649 | |
| 55 | R | A | -1.7194 | |
| 56 | P | A | -0.6748 | |
| 57 | S | A | -0.7854 | |
| 58 | G | A | -0.7918 | |
| 59 | V | A | -0.8380 | |
| 60 | P | A | -1.3198 | |
| 61 | D | A | -2.3460 | |
| 62 | R | A | -1.5736 | |
| 63 | F | A | 0.0000 | |
| 64 | S | A | -1.2281 | |
| 65 | G | A | -1.0149 | |
| 66 | S | A | -0.9214 | |
| 67 | I | A | -0.3735 | |
| 68 | D | A | -1.2260 | |
| 69 | S | A | -0.9625 | |
| 70 | S | A | -0.7919 | |
| 71 | S | A | -0.8019 | |
| 72 | N | A | -0.9487 | |
| 73 | S | A | 0.0000 | |
| 74 | A | A | 0.0000 | |
| 75 | S | A | -0.4484 | |
| 76 | L | A | 0.0000 | |
| 77 | T | A | -0.3041 | |
| 78 | I | A | 0.0000 | |
| 79 | S | A | -1.1852 | |
| 80 | G | A | -1.2628 | |
| 81 | L | A | 0.0000 | |
| 82 | T | A | -1.2182 | |
| 83 | A | A | -1.1997 | |
| 84 | D | A | -2.1152 | |
| 85 | D | A | 0.0000 | |
| 86 | E | A | -1.8369 | |
| 87 | A | A | 0.0000 | |
| 88 | D | A | -1.2254 | |
| 89 | Y | A | 0.0000 | |
| 90 | Y | A | 0.3464 | |
| 91 | C | A | 0.0000 | |
| 92 | Q | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | Y | A | 0.5687 | |
| 95 | D | A | 0.0000 | |
| 96 | D | A | -2.1550 | |
| 97 | S | A | -1.1958 | |
| 98 | N | A | -0.8948 | |
| 99 | Y | A | 1.0847 | |
| 100 | Y | A | 2.0358 | |
| 101 | V | A | 1.8999 | |
| 102 | F | A | 2.4619 | |
| 103 | G | A | 0.9912 | |
| 104 | T | A | 0.2891 | |
| 105 | G | A | 0.0000 | |
| 106 | T | A | 0.0000 | |
| 107 | K | A | -1.1006 | |
| 108 | V | A | 0.0000 | |
| 109 | T | A | 0.0000 | |
| 110 | V | A | -0.9462 | |
| 111 | L | A | -0.7623 | |
| 112 | G | A | -0.8414 | |
| 113 | Q | A | -1.1656 | |
| 114 | P | A | -1.4139 | |
| 115 | K | A | -2.4439 | |
| 116 | A | A | -1.8371 | |
| 117 | N | A | -1.9839 | |
| 118 | P | A | -0.8947 | |
| 119 | T | A | -0.3617 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | 0.1115 | |
| 122 | L | A | 0.4635 | |
| 123 | F | A | 1.1590 | |
| 124 | P | A | 0.2244 | |
| 125 | P | A | 0.0000 | |
| 126 | S | A | -1.0352 | |
| 127 | S | A | -1.7907 | |
| 128 | E | A | -2.8706 | |
| 129 | E | A | -2.5960 | |
| 130 | L | A | -2.2932 | |
| 131 | Q | A | -2.5602 | |
| 132 | A | A | -2.2326 | |
| 133 | N | A | -2.9220 | |
| 134 | K | A | -3.1869 | |
| 135 | A | A | 0.0000 | |
| 136 | T | A | -0.1298 | |
| 137 | V | A | 0.0000 | |
| 138 | L | A | 0.9789 | |
| 139 | C | A | 0.0000 | |
| 140 | L | A | 0.9279 | |
| 141 | I | A | 0.0000 | |
| 142 | S | A | -0.6071 | |
| 143 | D | A | -1.7299 | |
| 144 | F | A | 0.0000 | |
| 145 | Y | A | 0.0000 | |
| 146 | P | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | A | A | -0.4976 | |
| 149 | V | A | -0.2552 | |
| 150 | T | A | -0.0902 | |
| 151 | V | A | -0.0747 | |
| 152 | A | A | -0.5782 | |
| 153 | W | A | 0.0000 | |
| 154 | K | A | -1.4597 | |
| 155 | A | A | 0.0000 | |
| 156 | D | A | -1.7087 | |
| 157 | G | A | -1.3341 | |
| 158 | S | A | -0.8494 | |
| 159 | P | A | -1.0215 | |
| 160 | V | A | -0.9894 | |
| 161 | K | A | -1.9076 | |
| 162 | A | A | -1.0650 | |
| 163 | G | A | -0.9515 | |
| 164 | V | A | -1.0539 | |
| 165 | E | A | -1.9955 | |
| 166 | T | A | -1.0331 | |
| 167 | T | A | -1.3102 | |
| 168 | K | A | -2.1171 | |
| 169 | P | A | -1.3728 | |
| 170 | S | A | -1.7707 | |
| 171 | K | A | -2.8677 | |
| 172 | Q | A | -2.2743 | |
| 173 | S | A | -1.8788 | |
| 174 | N | A | -2.5385 | |
| 175 | N | A | -2.8027 | |
| 176 | K | A | -2.5507 | |
| 177 | Y | A | -1.7615 | |
| 178 | A | A | -0.9925 | |
| 179 | A | A | 0.0000 | |
| 180 | S | A | -0.1638 | |
| 181 | S | A | 0.0000 | |
| 182 | Y | A | 0.3115 | |
| 183 | L | A | 0.0000 | |
| 184 | S | A | -0.6434 | |
| 185 | L | A | -1.1991 | |
| 186 | T | A | -1.9991 | |
| 187 | P | A | 0.0000 | |
| 188 | E | A | -3.1991 | |
| 189 | Q | A | -2.5448 | |
| 190 | W | A | 0.0000 | |
| 191 | K | A | -3.0987 | |
| 192 | S | A | -2.4589 | |
| 193 | H | A | -2.4285 | |
| 194 | R | A | -2.6009 | |
| 195 | S | A | -1.9167 | |
| 196 | Y | A | 0.0000 | |
| 197 | S | A | -1.1839 | |
| 198 | C | A | 0.0000 | |
| 199 | Q | A | -1.1709 | |
| 200 | V | A | 0.0000 | |
| 201 | T | A | -0.6447 | |
| 202 | H | A | 0.0000 | |
| 203 | E | A | -1.6492 | |
| 204 | G | A | -1.0013 | |
| 205 | S | A | -0.7823 | |
| 206 | T | A | -0.7585 | |
| 207 | V | A | -0.9543 | |
| 208 | E | A | -2.2055 | |
| 209 | K | A | -1.6395 | |
| 210 | T | A | -1.0480 | |
| 211 | V | A | 0.0000 | |
| 212 | A | A | -1.5303 | |
| 213 | P | A | -1.6116 | |
| 214 | T | A | -1.5635 | |
| 215 | E | A | -1.8101 | |
| 216 | C | A | -0.7100 | |
| 217 | S | A | -0.6658 |