| Chain sequence(s) |
A: VYPKKTHWTAEITPNLHGTEVVVAGWVEDLVDAGKTKWVFVCDREGGAQVIVELVAGKTPDHLFKVFAELSREDVVVIKGIVEASKSRAVGVEIFPSEIWILNKAKPLPID
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:37)
[INFO] Main: Simulation completed successfully. (00:02:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 2.1654 | |
| 2 | Y | A | 1.6677 | |
| 3 | P | A | -0.1103 | |
| 4 | K | A | -1.5452 | |
| 5 | K | A | -1.2162 | |
| 6 | T | A | -1.1661 | |
| 7 | H | A | -0.7250 | |
| 8 | W | A | -0.7791 | |
| 9 | T | A | 0.0000 | |
| 10 | A | A | -1.3323 | |
| 11 | E | A | -1.4848 | |
| 12 | I | A | 0.0000 | |
| 13 | T | A | -1.1824 | |
| 14 | P | A | -1.5263 | |
| 15 | N | A | -1.9398 | |
| 16 | L | A | -1.5738 | |
| 17 | H | A | -1.9377 | |
| 18 | G | A | -1.4663 | |
| 19 | T | A | -1.4028 | |
| 20 | E | A | -1.8789 | |
| 21 | V | A | 0.0000 | |
| 22 | V | A | 0.0000 | |
| 23 | V | A | 0.0000 | |
| 24 | A | A | -0.1759 | |
| 25 | G | A | 0.0000 | |
| 26 | W | A | -0.7125 | |
| 27 | V | A | 0.0000 | |
| 28 | E | A | -1.9199 | |
| 29 | D | A | -1.5717 | |
| 30 | L | A | -0.5996 | |
| 31 | V | A | -0.2439 | |
| 32 | D | A | -1.7914 | |
| 33 | A | A | -1.2701 | |
| 34 | G | A | -1.7139 | |
| 35 | K | A | -2.1846 | |
| 36 | T | A | -1.2395 | |
| 37 | K | A | -0.8656 | |
| 38 | W | A | 0.0759 | |
| 39 | V | A | 0.0000 | |
| 40 | F | A | -0.3605 | |
| 41 | V | A | 0.0000 | |
| 42 | C | A | -1.1254 | |
| 43 | D | A | 0.0000 | |
| 44 | R | A | -2.4632 | |
| 45 | E | A | -2.5082 | |
| 46 | G | A | -1.9791 | |
| 47 | G | A | -1.4757 | |
| 48 | A | A | -1.2498 | |
| 49 | Q | A | -1.2801 | |
| 50 | V | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | V | A | 0.0000 | |
| 53 | E | A | 0.0000 | |
| 54 | L | A | 0.0000 | |
| 55 | V | A | -1.0453 | |
| 56 | A | A | -1.5610 | |
| 57 | G | A | -1.7406 | |
| 58 | K | A | -2.0665 | |
| 59 | T | A | 0.0000 | |
| 60 | P | A | -1.9206 | |
| 61 | D | A | -2.7996 | |
| 62 | H | A | -2.3852 | |
| 63 | L | A | 0.0000 | |
| 64 | F | A | -1.6873 | |
| 65 | K | A | -2.4359 | |
| 66 | V | A | -1.3508 | |
| 67 | F | A | 0.0000 | |
| 68 | A | A | -1.3135 | |
| 69 | E | A | -1.9271 | |
| 70 | L | A | 0.0000 | |
| 71 | S | A | -2.2174 | |
| 72 | R | A | -3.1767 | |
| 73 | E | A | -3.2521 | |
| 74 | D | A | 0.0000 | |
| 75 | V | A | -0.4166 | |
| 76 | V | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | I | A | 0.0000 | |
| 79 | K | A | -0.9941 | |
| 80 | G | A | 0.0000 | |
| 81 | I | A | -0.4444 | |
| 82 | V | A | 0.0000 | |
| 83 | E | A | -1.4743 | |
| 84 | A | A | -1.4645 | |
| 85 | S | A | -1.5859 | |
| 86 | K | A | -2.2965 | |
| 87 | S | A | -1.8009 | |
| 88 | R | A | -2.2938 | |
| 89 | A | A | -1.0440 | |
| 90 | V | A | -0.8944 | |
| 91 | G | A | -1.3240 | |
| 92 | V | A | 0.0000 | |
| 93 | E | A | 0.0000 | |
| 94 | I | A | 0.0000 | |
| 95 | F | A | -0.2055 | |
| 96 | P | A | 0.0000 | |
| 97 | S | A | -0.9214 | |
| 98 | E | A | -0.7106 | |
| 99 | I | A | 0.0000 | |
| 100 | W | A | 0.8955 | |
| 101 | I | A | 0.3965 | |
| 102 | L | A | 0.3367 | |
| 103 | N | A | -1.7541 | |
| 104 | K | A | -3.0967 | |
| 105 | A | A | -2.5427 | |
| 106 | K | A | -2.5533 | |
| 107 | P | A | -0.9419 | |
| 108 | L | A | 0.4267 | |
| 109 | P | A | 0.6380 | |
| 110 | I | A | 1.3983 | |
| 111 | D | A | -0.7073 |