| Chain sequence(s) |
A: IVVYTDREVHGAVGSRVTLHHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:00)
[INFO] Main: Simulation completed successfully. (00:02:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 1.9471 | |
| 2 | V | A | 1.8963 | |
| 3 | V | A | 1.0623 | |
| 4 | Y | A | 0.3510 | |
| 5 | T | A | -1.4512 | |
| 6 | D | A | -3.0977 | |
| 7 | R | A | -3.3754 | |
| 8 | E | A | -2.5508 | |
| 9 | V | A | -1.3187 | |
| 10 | H | A | -0.4905 | |
| 11 | G | A | 0.0000 | |
| 12 | A | A | -0.8370 | |
| 13 | V | A | -1.1194 | |
| 14 | G | A | -1.7448 | |
| 15 | S | A | -1.8784 | |
| 16 | R | A | -2.5292 | |
| 17 | V | A | -1.1563 | |
| 18 | T | A | -0.7376 | |
| 19 | L | A | 0.0000 | |
| 20 | H | A | -1.1029 | |
| 21 | C | A | 0.0000 | |
| 22 | S | A | 0.5229 | |
| 23 | F | A | 0.0000 | |
| 24 | W | A | 2.0010 | |
| 25 | S | A | 1.0505 | |
| 26 | S | A | -0.0893 | |
| 27 | E | A | -0.7968 | |
| 28 | W | A | 0.3987 | |
| 29 | V | A | 0.1521 | |
| 30 | S | A | -1.1910 | |
| 31 | D | A | -2.8645 | |
| 32 | D | A | -2.6809 | |
| 33 | I | A | 0.0000 | |
| 34 | S | A | -1.4759 | |
| 35 | F | A | 0.0000 | |
| 36 | T | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | R | A | -1.1411 | |
| 39 | Y | A | 0.0000 | |
| 40 | Q | A | -2.0890 | |
| 41 | P | A | -2.0248 | |
| 42 | E | A | -2.5063 | |
| 43 | G | A | -2.1679 | |
| 44 | G | A | -2.5499 | |
| 45 | R | A | -3.2129 | |
| 46 | D | A | -2.8398 | |
| 47 | A | A | -1.4432 | |
| 48 | I | A | -0.5209 | |
| 49 | S | A | -0.4881 | |
| 50 | I | A | 0.0000 | |
| 51 | F | A | 0.0000 | |
| 52 | H | A | -0.2806 | |
| 53 | Y | A | 0.0000 | |
| 54 | A | A | -1.6990 | |
| 55 | K | A | -2.7310 | |
| 56 | G | A | -2.3607 | |
| 57 | Q | A | -1.6198 | |
| 58 | P | A | -0.4238 | |
| 59 | Y | A | 0.4917 | |
| 60 | I | A | -0.0436 | |
| 61 | D | A | -1.1099 | |
| 62 | E | A | -1.8055 | |
| 63 | V | A | 0.1523 | |
| 64 | G | A | -0.3339 | |
| 65 | T | A | -0.5672 | |
| 66 | F | A | 0.0000 | |
| 67 | K | A | -2.1444 | |
| 68 | E | A | -2.8091 | |
| 69 | R | A | -2.2992 | |
| 70 | I | A | -1.3720 | |
| 71 | Q | A | -0.6183 | |
| 72 | W | A | 0.4205 | |
| 73 | V | A | 0.5783 | |
| 74 | G | A | -0.0138 | |
| 75 | D | A | 0.0000 | |
| 76 | P | A | -1.7150 | |
| 77 | R | A | -2.0542 | |
| 78 | W | A | -0.0866 | |
| 79 | K | A | -0.5723 | |
| 80 | D | A | -0.1629 | |
| 81 | G | A | 0.0000 | |
| 82 | S | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | V | A | 0.0000 | |
| 85 | I | A | 0.0000 | |
| 86 | H | A | -2.1909 | |
| 87 | N | A | -2.5529 | |
| 88 | L | A | 0.0000 | |
| 89 | D | A | -1.2780 | |
| 90 | Y | A | 0.5940 | |
| 91 | S | A | -0.1815 | |
| 92 | D | A | 0.0000 | |
| 93 | N | A | -0.4826 | |
| 94 | G | A | 0.0000 | |
| 95 | T | A | -1.4943 | |
| 96 | F | A | 0.0000 | |
| 97 | T | A | -1.0482 | |
| 98 | C | A | 0.0000 | |
| 99 | D | A | -0.9794 | |
| 100 | V | A | 0.0000 | |
| 101 | K | A | -0.6544 | |
| 102 | N | A | -1.1880 | |
| 103 | P | A | -0.9603 | |
| 104 | P | A | -0.5590 | |
| 105 | D | A | 0.1383 | |
| 106 | I | A | 2.0644 | |
| 107 | V | A | 1.7433 | |
| 108 | G | A | 0.0879 | |
| 109 | K | A | -0.8417 | |
| 110 | T | A | -0.7912 | |
| 111 | S | A | -1.1120 | |
| 112 | Q | A | -2.1252 | |
| 113 | V | A | 0.0000 | |
| 114 | T | A | -1.6301 | |
| 115 | L | A | 0.0000 | |
| 116 | Y | A | 0.3542 | |
| 117 | V | A | 0.0000 | |
| 118 | F | A | -0.0796 | |
| 119 | E | A | -1.7676 | |
| 120 | K | A | -1.5357 | |
| 121 | V | A | 0.6112 |