| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAYQHETADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPVGVPLPDAPPPSKLYVKPPPSSPYAVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPAINVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9499 | |
| 2 | L | A | 1.9698 | |
| 3 | P | A | 0.6521 | |
| 4 | P | A | 0.3702 | |
| 5 | T | A | 0.1277 | |
| 6 | T | A | 0.1271 | |
| 7 | P | A | 0.1927 | |
| 8 | V | A | 1.2172 | |
| 9 | A | A | 0.0407 | |
| 10 | K | A | -1.1507 | |
| 11 | V | A | -0.4029 | |
| 12 | Q | A | -1.5201 | |
| 13 | S | A | -1.6091 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4508 | |
| 16 | E | A | -2.4528 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4496 | |
| 20 | P | A | 0.1027 | |
| 21 | T | A | 0.1135 | |
| 22 | S | A | -0.1701 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1008 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1517 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6653 | |
| 31 | R | A | -2.5541 | |
| 32 | L | A | -0.7190 | |
| 33 | L | A | 1.2474 | |
| 34 | T | A | 1.6620 | |
| 35 | V | A | 2.0465 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1983 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6080 | |
| 40 | K | A | -1.6115 | |
| 41 | D | A | -0.8713 | |
| 42 | I | A | 0.8319 | |
| 43 | V | A | 1.0234 | |
| 44 | K | A | -1.1959 | |
| 45 | N | A | -1.9306 | |
| 46 | G | A | -1.2350 | |
| 47 | K | A | -0.9361 | |
| 48 | V | A | 1.5053 | |
| 49 | V | A | 2.0739 | |
| 50 | V | A | 1.3324 | |
| 51 | P | A | 0.5225 | |
| 52 | K | A | -0.5910 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1301 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3819 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3089 | |
| 70 | K | A | -1.8231 | |
| 71 | F | A | -0.6727 | |
| 72 | A | A | -0.5693 | |
| 73 | L | A | -0.8567 | |
| 74 | P | A | -1.2559 | |
| 75 | Q | A | -2.4724 | |
| 76 | K | A | -3.0890 | |
| 77 | D | A | -2.9874 | |
| 78 | F | A | -1.6384 | |
| 79 | Y | A | -1.9072 | |
| 80 | D | A | -2.7304 | |
| 81 | P | A | -2.3421 | |
| 82 | E | A | -3.0617 | |
| 83 | K | A | -3.4270 | |
| 84 | E | A | -2.4860 | |
| 85 | R | A | -1.3064 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6249 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9521 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.2929 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6644 | |
| 99 | G | A | -0.5376 | |
| 100 | P | A | -0.4182 | |
| 101 | L | A | 0.0116 | |
| 102 | G | A | -0.2460 | |
| 103 | K | A | -0.6610 | |
| 104 | G | A | -0.4998 | |
| 105 | T | A | -0.4599 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1450 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3867 | |
| 110 | L | A | 0.2729 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1470 | |
| 113 | K | A | -0.4999 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2778 | |
| 117 | T | A | -0.8859 | |
| 118 | E | A | -1.8857 | |
| 119 | N | A | -2.0078 | |
| 120 | P | A | -1.4130 | |
| 121 | T | A | -0.7712 | |
| 122 | A | A | -0.5159 | |
| 123 | Y | A | -0.2150 | |
| 124 | Q | A | -1.4714 | |
| 125 | H | A | -1.4975 | |
| 126 | E | A | -2.2922 | |
| 127 | T | A | -1.7195 | |
| 128 | A | A | -1.2880 | |
| 129 | D | A | -2.2517 | |
| 130 | D | A | -1.8139 | |
| 131 | R | A | -1.0631 | |
| 132 | V | A | 0.2086 | |
| 133 | A | A | 0.4127 | |
| 134 | F | A | 0.2636 | |
| 135 | S | A | -0.0740 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6835 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5438 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2691 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1191 | |
| 157 | D | A | 0.3666 | |
| 158 | I | A | 0.8684 | |
| 159 | A | A | 0.1238 | |
| 160 | E | A | -1.4700 | |
| 161 | P | A | -0.2272 | |
| 162 | C | A | 0.1891 | |
| 163 | P | A | -0.1649 | |
| 164 | G | A | -0.0635 | |
| 165 | L | A | 0.6131 | |
| 166 | P | A | -0.0998 | |
| 167 | P | A | -0.3346 | |
| 168 | G | A | -0.4176 | |
| 169 | A | A | 0.3052 | |
| 170 | C | A | 1.1089 | |
| 171 | P | A | 0.5691 | |
| 172 | P | A | 0.7859 | |
| 173 | I | A | 2.0404 | |
| 174 | Q | A | 0.8453 | |
| 175 | L | A | 1.4350 | |
| 176 | V | A | 0.8192 | |
| 177 | N | A | -0.3524 | |
| 178 | S | A | -0.0229 | |
| 179 | V | A | 0.3482 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3615 | |
| 182 | D | A | 0.0737 | |
| 183 | G | A | -0.1526 | |
| 184 | D | A | -0.5743 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1569 | |
| 190 | F | A | 0.0524 | |
| 191 | G | A | -0.1103 | |
| 192 | N | A | -0.2917 | |
| 193 | M | A | -0.1596 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4015 | |
| 197 | E | A | -2.5882 | |
| 198 | L | A | -1.1958 | |
| 199 | Q | A | -2.5220 | |
| 200 | Q | A | -3.3364 | |
| 201 | D | A | -3.6031 | |
| 202 | R | A | -3.3480 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1808 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3913 | |
| 211 | S | A | -1.9285 | |
| 212 | T | A | -1.5041 | |
| 213 | R | A | -2.1842 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1748 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2491 | |
| 220 | L | A | 0.4380 | |
| 221 | K | A | -1.4272 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -1.0075 | |
| 224 | N | A | -1.7456 | |
| 225 | E | A | -1.3733 | |
| 226 | A | A | -0.6918 | |
| 227 | Y | A | -0.4750 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7119 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1451 | |
| 234 | F | A | 0.0208 | |
| 235 | G | A | -0.9511 | |
| 236 | R | A | -2.7400 | |
| 237 | R | A | -3.0638 | |
| 238 | E | A | -2.2184 | |
| 239 | Q | A | -0.1931 | |
| 240 | V | A | 1.5192 | |
| 241 | Y | A | 1.2162 | |
| 242 | A | A | 0.1481 | |
| 243 | R | A | -1.2610 | |
| 244 | H | A | -1.0428 | |
| 245 | F | A | 0.0048 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5352 | |
| 249 | S | A | -1.1697 | |
| 250 | G | A | -0.8893 | |
| 251 | P | A | -0.2932 | |
| 252 | V | A | 0.3836 | |
| 253 | G | A | 0.4313 | |
| 254 | V | A | 1.7160 | |
| 255 | P | A | 0.6192 | |
| 256 | L | A | 0.6574 | |
| 257 | P | A | -0.6586 | |
| 258 | D | A | -1.7951 | |
| 259 | A | A | -1.0904 | |
| 260 | P | A | -1.2017 | |
| 261 | P | A | -0.9392 | |
| 262 | P | A | -0.4432 | |
| 263 | S | A | -0.7768 | |
| 264 | K | A | -0.7912 | |
| 265 | L | A | 0.8216 | |
| 266 | Y | A | 0.7549 | |
| 267 | V | A | 0.7614 | |
| 268 | K | A | -0.7745 | |
| 269 | P | A | 0.0190 | |
| 270 | P | A | -0.4978 | |
| 271 | P | A | -0.3397 | |
| 272 | S | A | -0.3048 | |
| 273 | S | A | 0.2615 | |
| 274 | P | A | 0.5155 | |
| 275 | Y | A | 1.3751 | |
| 276 | A | A | 1.0788 | |
| 277 | V | A | 2.3037 | |
| 278 | L | A | 1.7312 | |
| 279 | P | A | 0.4145 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.6870 | |
| 282 | D | A | -0.1070 | |
| 283 | Y | A | 1.1192 | |
| 284 | F | A | 0.8161 | |
| 285 | G | A | 0.1963 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9178 | |
| 291 | L | A | 1.6188 | |
| 292 | V | A | 0.6190 | |
| 293 | S | A | -0.1678 | |
| 294 | S | A | -0.9722 | |
| 295 | D | A | -1.8461 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1584 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6139 | |
| 301 | R | A | -1.8655 | |
| 302 | P | A | -0.9625 | |
| 303 | F | A | -0.1722 | |
| 304 | W | A | -0.5143 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0736 | |
| 307 | R | A | -2.9239 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7854 | |
| 310 | G | A | -1.4278 | |
| 311 | N | A | -1.4027 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8681 | |
| 319 | N | A | -0.8808 | |
| 320 | E | A | -1.0402 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3558 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1631 | |
| 333 | N | A | 0.4130 | |
| 334 | F | A | 1.4646 | |
| 335 | T | A | 0.7415 | |
| 336 | I | A | 0.3555 | |
| 337 | S | A | -0.9385 | |
| 338 | Q | A | -1.5595 | |
| 339 | Q | A | -0.8327 | |
| 340 | L | A | 0.6006 | |
| 341 | S | A | 0.2841 | |
| 342 | T | A | 0.0128 | |
| 343 | P | A | -0.2269 | |
| 344 | A | A | -0.0321 | |
| 345 | I | A | 0.6504 | |
| 346 | N | A | 0.0113 | |
| 347 | V | A | 1.7019 | |
| 348 | Y | A | 1.5035 | |
| 349 | D | A | -0.0723 | |
| 350 | P | A | -0.6900 | |
| 351 | S | A | -0.5259 | |
| 352 | N | A | -0.2223 | |
| 353 | F | A | -0.8013 | |
| 354 | K | A | -1.9052 | |
| 355 | N | A | -1.7651 | |
| 356 | Y | A | -0.1429 | |
| 357 | L | A | 0.5830 | |
| 358 | R | A | 0.9392 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4789 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0169 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8441 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6412 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3125 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3193 | |
| 376 | L | A | -1.7525 | |
| 377 | D | A | -2.0298 | |
| 378 | P | A | -1.0619 | |
| 379 | G | A | -1.0138 | |
| 380 | V | A | -0.9206 | |
| 381 | L | A | -0.5353 | |
| 382 | A | A | -0.6533 | |
| 383 | H | A | -0.8359 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3799 | |
| 386 | T | A | -0.5614 | |
| 387 | M | A | -0.3213 | |
| 388 | N | A | -0.8551 | |
| 389 | P | A | -1.2502 | |
| 390 | T | A | -1.4922 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5152 | |
| 393 | E | A | -2.8939 | |
| 394 | N | A | -2.6902 | |
| 395 | W | A | -1.5130 | |
| 396 | N | A | -1.4602 | |
| 397 | L | A | -0.2931 | |
| 398 | G | A | 0.4921 | |
| 399 | F | A | 2.4006 | |
| 400 | V | A | 1.8299 | |
| 401 | P | A | 0.0474 | |
| 402 | P | A | -1.8154 | |
| 403 | K | A | -3.4636 | |
| 404 | E | A | -3.8743 | |
| 405 | R | A | -3.9688 | |
| 406 | E | A | -3.7789 | |
| 407 | D | A | -2.8677 | |
| 408 | P | A | -1.7556 | |
| 409 | Y | A | -0.9947 | |
| 410 | K | A | -2.0984 | |
| 411 | G | A | -0.6388 | |
| 412 | L | A | 0.6592 | |
| 413 | I | A | 1.5747 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4009 | |
| 416 | E | A | -1.6757 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8681 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9405 | |
| 421 | E | A | -2.5703 | |
| 422 | R | A | -2.1261 | |
| 423 | F | A | -1.0806 | |
| 424 | S | A | -1.3508 | |
| 425 | Q | A | -1.7848 | |
| 426 | D | A | -2.9674 | |
| 427 | L | A | -2.1703 | |
| 428 | D | A | -3.0437 | |
| 429 | Q | A | -2.7552 | |
| 430 | F | A | -1.6194 | |
| 431 | A | A | -1.1296 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2348 | |
| 435 | K | A | -1.0843 | |
| 436 | F | A | -0.0741 | |
| 437 | L | A | 0.8042 | |
| 438 | Y | A | 0.6388 | |
| 439 | Q | A | -0.3685 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine