Project name: 12.37C5

Status: done

Started: 2026-07-07 08:28:50
Settings
Chain sequence(s) H: EVQLQQSGPELVKPGASVKISCKASGYTFTDYYMNWVRQSHGKSLEWIGDINPNNGGTKYNQKFKGKATATVDKSSSTAYMELRSLTSEDSAVYYCAKTGEWTVGIFDVWGTGTTVTVSS
L: QIVLTQSPAIMSASPGEKVTISCSASSSVSYMYWFQQKPGSSPKPWIYRTSNLASGVPGRFSGSGSGSSYSLTVSYMEAEDAATYYCQQYHSYPRTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:10)
Show buried residues

Minimal score value
-2.9828
Maximal score value
1.4006
Average score
-0.5526
Total score value
-124.8867

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9833
2 V H -1.0123
3 Q H -1.9091
4 L H 0.0000
5 Q H -1.9596
6 Q H 0.0000
7 S H -1.0860
8 G H -0.8254
9 P H -0.4904
11 E H -0.5055
12 L H 0.7338
13 V H -0.2957
14 K H -1.6314
15 P H -1.3774
16 G H -1.2127
17 A H -1.0041
18 S H -1.2689
19 V H 0.0000
20 K H -1.9961
21 I H 0.0000
22 S H -0.8588
23 C H 0.0000
24 K H -1.6479
25 A H 0.0000
26 S H -1.2805
27 G H -1.1055
28 Y H -0.6419
29 T H -0.4991
30 F H 0.0000
35 T H -1.5675
36 D H -1.9492
37 Y H -0.5475
38 Y H 0.1624
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.9617
45 S H -1.5367
46 H H -1.9207
47 G H -1.7972
48 K H -2.4424
49 S H -1.4154
50 L H 0.0000
51 E H -0.9663
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 D H 0.0000
56 I H 0.0000
57 N H -1.1235
58 P H 0.0000
59 N H -2.3751
62 N H -2.1650
63 G H -1.5394
64 G H -1.2021
65 T H -0.8843
66 K H -1.4978
67 Y H -1.4085
68 N H -1.8445
69 Q H -2.7820
70 K H -2.9305
71 F H 0.0000
72 K H -2.9828
74 G H -1.9209
75 K H -1.6355
76 A H 0.0000
77 T H -0.8026
78 A H -0.3567
79 T H -0.3767
80 V H -0.8113
81 D H -1.3768
82 K H -2.0942
83 S H -1.0713
84 S H -0.9319
85 S H -1.0677
86 T H 0.0000
87 A H 0.0000
88 Y H -0.3951
89 M H 0.0000
90 E H -1.1937
91 L H 0.0000
92 R H -1.3602
93 S H -1.0831
94 L H 0.0000
95 T H -1.2703
96 S H -1.4329
97 E H -2.0591
98 D H 0.0000
99 S H -0.7435
100 A H 0.0000
101 V H -0.0087
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 T H 0.1816
108 G H 0.0000
109 E H -1.0051
110 W H 0.9151
111 T H 0.5275
112 V H 1.4006
113 G H 0.0000
114 I H 0.2738
115 F H 0.0000
116 D H -0.6699
117 V H -0.2042
118 W H 0.0000
119 G H 0.0000
120 T H -0.5854
121 G H -0.3796
122 T H 0.0000
123 T H -0.2205
124 V H 0.0000
125 T H -0.1984
126 V H 0.0000
127 S H -0.5756
128 S H -0.7413
1 Q L -0.7732
2 I L 0.0000
3 V L 1.2481
4 L L 0.0000
5 T L 0.0749
6 Q L 0.0000
7 S L -0.1296
8 P L 0.2383
9 A L 0.5393
10 I L 1.3770
11 M L 0.3538
12 S L -0.7392
13 A L 0.0000
14 S L -1.5000
15 P L -1.3175
16 G L -1.2204
17 E L -2.1173
18 K L -2.1001
19 V L 0.0000
20 T L -0.6443
21 I L 0.0000
22 S L -0.3282
23 C L 0.0000
24 S L -0.2120
25 A L 0.0000
26 S L 0.0190
27 S L -0.3044
28 S L -0.6478
29 V L 0.0000
37 S L -0.5180
38 Y L -0.2129
39 M L 0.0000
40 Y L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L 0.0000
44 Q L -0.9590
45 K L -1.2137
46 P L -0.7724
47 G L -0.7965
48 S L -0.8001
49 S L -0.6127
50 P L 0.0000
51 K L -1.3282
52 P L 0.0000
53 W L 0.0000
54 I L 0.0000
55 Y L -0.2760
56 R L -0.9463
57 T L 0.0000
65 S L -0.8188
66 N L -1.0013
67 L L -0.3211
68 A L -0.4689
69 S L -0.4752
70 G L -0.5688
71 V L 0.0000
72 P L -0.3806
74 G L -0.5340
75 R L 0.0000
76 F L 0.0000
77 S L -0.4719
78 G L -0.5705
79 S L -0.6827
80 G L -0.6302
83 S L -0.5738
84 G L -0.6054
85 S L -0.6133
86 S L -0.6716
87 Y L 0.0000
88 S L -0.3855
89 L L 0.0000
90 T L -0.4083
91 V L 0.0000
92 S L -0.7679
93 Y L -0.4054
94 M L 0.0000
95 E L -0.9246
96 A L -1.1019
97 E L -1.4737
98 D L 0.0000
99 A L -1.1837
100 A L 0.0000
101 T L -0.6302
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.2341
108 H L -0.4660
109 S L -0.3283
114 Y L 0.0303
115 P L -0.6543
116 R L 0.0000
117 T L 0.0000
118 F L 0.0000
119 G L 0.0000
120 G L -0.7568
121 G L 0.0000
122 T L 0.0000
123 K L -0.7266
124 L L 0.0000
125 E L -1.2387
126 I L -1.0656
127 K L -1.8170
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Laboratory of Theory of Biopolymers 2018