| Chain sequence(s) |
A: MDKDCEMKRTTLDSPLGKLELSGCEQGLHRIIFLGKGTSAADAVEVPAPAAVLGGPEPLMQATAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYSHLAALAGNPAATAAVKTALSGNPVPILIPCHRVVQGDLDVGGYEGGLAVKEWLLAHEGHRLGKPGLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:40)
[INFO] Main: Simulation completed successfully. (00:02:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.4019 | |
| 2 | D | A | -2.1862 | |
| 3 | K | A | -3.0209 | |
| 4 | D | A | -3.1541 | |
| 5 | C | A | -2.8074 | |
| 6 | E | A | -3.0027 | |
| 7 | M | A | -1.5473 | |
| 8 | K | A | -1.8407 | |
| 9 | R | A | -1.2930 | |
| 10 | T | A | -0.2763 | |
| 11 | T | A | -0.4434 | |
| 12 | L | A | -1.0850 | |
| 13 | D | A | -2.3008 | |
| 14 | S | A | 0.0000 | |
| 15 | P | A | -0.8748 | |
| 16 | L | A | 0.0000 | |
| 17 | G | A | -1.4493 | |
| 18 | K | A | -1.9165 | |
| 19 | L | A | 0.0000 | |
| 20 | E | A | 0.0000 | |
| 21 | L | A | 0.0000 | |
| 22 | S | A | -0.7621 | |
| 23 | G | A | 0.0000 | |
| 24 | C | A | 0.0000 | |
| 25 | E | A | -2.9302 | |
| 26 | Q | A | -1.9034 | |
| 27 | G | A | 0.0000 | |
| 28 | L | A | 0.0000 | |
| 29 | H | A | 0.0000 | |
| 30 | R | A | -0.8925 | |
| 31 | I | A | 0.0000 | |
| 32 | I | A | 0.0949 | |
| 33 | F | A | -0.4887 | |
| 34 | L | A | -0.4834 | |
| 35 | G | A | -1.4225 | |
| 36 | K | A | -2.2504 | |
| 37 | G | A | -1.5742 | |
| 38 | T | A | -1.1861 | |
| 39 | S | A | -1.0207 | |
| 40 | A | A | -0.5408 | |
| 41 | A | A | -0.7556 | |
| 42 | D | A | -1.8323 | |
| 43 | A | A | -0.8993 | |
| 44 | V | A | -0.4574 | |
| 45 | E | A | -1.3391 | |
| 46 | V | A | 0.0794 | |
| 47 | P | A | -0.3645 | |
| 48 | A | A | -0.1699 | |
| 49 | P | A | -0.0404 | |
| 50 | A | A | 0.0560 | |
| 51 | A | A | 0.7993 | |
| 52 | V | A | 1.2764 | |
| 53 | L | A | 1.4774 | |
| 54 | G | A | 0.3314 | |
| 55 | G | A | -0.5808 | |
| 56 | P | A | 0.0000 | |
| 57 | E | A | -2.0314 | |
| 58 | P | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | M | A | 0.1400 | |
| 61 | Q | A | -0.0103 | |
| 62 | A | A | 0.0000 | |
| 63 | T | A | -0.2624 | |
| 64 | A | A | 0.0721 | |
| 65 | W | A | 0.0000 | |
| 66 | L | A | 0.0000 | |
| 67 | N | A | -1.2148 | |
| 68 | A | A | 0.0000 | |
| 69 | Y | A | 0.0000 | |
| 70 | F | A | 0.0000 | |
| 71 | H | A | -1.7853 | |
| 72 | Q | A | -2.1956 | |
| 73 | P | A | -2.2178 | |
| 74 | E | A | -2.8689 | |
| 75 | A | A | -2.3638 | |
| 76 | I | A | 0.0000 | |
| 77 | E | A | -2.6962 | |
| 78 | E | A | -2.5966 | |
| 79 | F | A | -0.7594 | |
| 80 | P | A | -0.1474 | |
| 81 | V | A | 0.7489 | |
| 82 | P | A | 0.0000 | |
| 83 | A | A | -0.2740 | |
| 84 | L | A | -0.2205 | |
| 85 | H | A | -0.6893 | |
| 86 | H | A | -0.4431 | |
| 87 | P | A | -0.3522 | |
| 88 | V | A | -0.8156 | |
| 89 | F | A | 0.0000 | |
| 90 | Q | A | -1.5195 | |
| 91 | Q | A | -2.2974 | |
| 92 | E | A | -2.5540 | |
| 93 | S | A | -1.2966 | |
| 94 | F | A | -0.5605 | |
| 95 | T | A | -0.6773 | |
| 96 | R | A | -1.1045 | |
| 97 | Q | A | -0.7683 | |
| 98 | V | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | W | A | -0.3253 | |
| 101 | K | A | -0.6613 | |
| 102 | L | A | 0.0000 | |
| 103 | L | A | -0.5811 | |
| 104 | K | A | -1.3677 | |
| 105 | V | A | -0.3531 | |
| 106 | V | A | 0.0000 | |
| 107 | K | A | -1.8148 | |
| 108 | F | A | -1.0043 | |
| 109 | G | A | -1.3063 | |
| 110 | E | A | -1.2921 | |
| 111 | V | A | 0.0000 | |
| 112 | I | A | 0.0000 | |
| 113 | S | A | 0.0000 | |
| 114 | Y | A | 0.0000 | |
| 115 | S | A | -0.5675 | |
| 116 | H | A | -0.3619 | |
| 117 | L | A | 0.0000 | |
| 118 | A | A | 0.0000 | |
| 119 | A | A | -0.5904 | |
| 120 | L | A | -0.1327 | |
| 121 | A | A | -0.6231 | |
| 122 | G | A | -1.0483 | |
| 123 | N | A | -1.4974 | |
| 124 | P | A | -0.9528 | |
| 125 | A | A | -0.5650 | |
| 126 | A | A | -0.6584 | |
| 127 | T | A | -0.7463 | |
| 128 | A | A | -0.4667 | |
| 129 | A | A | -0.5434 | |
| 130 | V | A | 0.0000 | |
| 131 | K | A | -1.6200 | |
| 132 | T | A | -0.9311 | |
| 133 | A | A | 0.0000 | |
| 134 | L | A | 0.0000 | |
| 135 | S | A | -1.2172 | |
| 136 | G | A | -0.9081 | |
| 137 | N | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | P | A | 0.0000 | |
| 141 | I | A | 0.0000 | |
| 142 | L | A | 0.0000 | |
| 143 | I | A | 0.0000 | |
| 144 | P | A | 0.0000 | |
| 145 | C | A | 0.0000 | |
| 146 | H | A | 0.0000 | |
| 147 | R | A | 0.0000 | |
| 148 | V | A | 0.0000 | |
| 149 | V | A | 0.0000 | |
| 150 | Q | A | -1.7025 | |
| 151 | G | A | -1.5667 | |
| 152 | D | A | -2.1457 | |
| 153 | L | A | -1.0744 | |
| 154 | D | A | -1.7368 | |
| 155 | V | A | -0.7500 | |
| 156 | G | A | -0.8358 | |
| 157 | G | A | -0.8673 | |
| 158 | Y | A | -0.6155 | |
| 159 | E | A | -1.0953 | |
| 160 | G | A | -0.6823 | |
| 161 | G | A | -0.2917 | |
| 162 | L | A | 1.0234 | |
| 163 | A | A | 0.5019 | |
| 164 | V | A | 0.0000 | |
| 165 | K | A | 0.0000 | |
| 166 | E | A | -0.5857 | |
| 167 | W | A | -0.0170 | |
| 168 | L | A | 0.0000 | |
| 169 | L | A | 0.0000 | |
| 170 | A | A | -0.8451 | |
| 171 | H | A | -0.6217 | |
| 172 | E | A | 0.0000 | |
| 173 | G | A | -1.1315 | |
| 174 | H | A | -1.8568 | |
| 175 | R | A | -2.4690 | |
| 176 | L | A | -1.6550 | |
| 177 | G | A | -1.6036 | |
| 178 | K | A | -2.4878 | |
| 179 | P | A | -1.7576 | |
| 180 | G | A | -1.2811 | |
| 181 | L | A | -0.1158 | |
| 182 | G | A | -0.5996 |