Project name: aaa

Status: done

Started: 2024-12-07 11:31:54
Settings
Chain sequence(s) A: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
C: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
B: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
E: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
D: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
G: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
F: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
I: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
H: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:17)
Show buried residues

Minimal score value
-3.5275
Maximal score value
1.2347
Average score
-1.0297
Total score value
-287.2725

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
23 Q A -1.8541
24 L A -1.0964
25 H A -1.3952
26 Q A 0.0000
27 Q A -1.5676
28 Q A 0.0000
29 H A -1.5583
30 Q A 0.0000
31 Q A -1.6529
32 Q A 0.0000
33 H A -1.5591
34 Q A 0.0000
35 Q A -2.0683
36 H A -2.1916
37 Q A 0.0000
38 Q A -1.6244
39 H A 0.0000
40 Q A 0.0000
41 Q A 0.0000
42 Q A -1.4480
43 Q A 0.0000
44 Q A -1.0770
45 L A 0.0000
46 H A 0.0000
47 Q A 0.0000
48 H A 0.0000
49 Q A 0.0000
50 Q A 0.0000
51 Q A 0.0000
52 L A 0.4162
53 S A 0.2956
23 Q B -1.8181
24 L B -1.0333
25 H B -1.3808
26 Q B 0.0000
27 Q B -1.8331
28 Q B 0.0000
29 H B -1.7987
30 Q B 0.0000
31 Q B -1.6691
32 Q B 0.0000
33 H B -1.6818
34 Q B 0.0000
35 Q B -2.9019
36 H B -3.1128
37 Q B 0.0000
38 Q B -1.7869
39 H B 0.0000
40 Q B 0.0000
41 Q B 0.0000
42 Q B -1.4564
43 Q B 0.0000
44 Q B -1.1100
45 L B 0.0000
46 H B 0.0000
47 Q B 0.0000
48 H B 0.0000
49 Q B 0.0000
50 Q B 0.0000
51 Q B 0.0000
52 L B 0.4519
53 S B 0.2961
23 Q C -1.8262
24 L C -1.0368
25 H C -1.3014
26 Q C 0.0000
27 Q C -1.5538
28 Q C 0.0000
29 H C -1.6828
30 Q C 0.0000
31 Q C -2.0282
32 Q C 0.0000
33 H C -2.1973
34 Q C 0.0000
35 Q C -3.5275
36 H C -3.3884
37 Q C 0.0000
38 Q C -1.8667
39 H C 0.0000
40 Q C 0.0000
41 Q C 0.0000
42 Q C -1.4420
43 Q C 0.0000
44 Q C -1.1313
45 L C 0.0000
46 H C 0.0000
47 Q C 0.0000
48 H C 0.0000
49 Q C 0.0000
50 Q C 0.0000
51 Q C 0.0000
52 L C 0.4620
53 S C 0.3114
23 Q D -1.5034
24 L D -0.3702
25 H D -1.5005
26 Q D -1.0820
27 Q D -2.0896
28 Q D -1.7265
29 H D -2.0275
30 Q D -1.7587
31 Q D -2.1622
32 Q D -1.6340
33 H D -1.8747
34 Q D -1.7067
35 Q D -2.4104
36 H D -2.1888
37 Q D -1.6891
38 Q D -1.7406
39 H D -1.0128
40 Q D -1.0431
41 Q D -1.1027
42 Q D -1.1853
43 Q D -1.2021
44 Q D -1.6402
45 L D 0.0000
46 H D -0.8983
47 Q D 0.0000
48 H D -1.0153
49 Q D 0.0000
50 Q D -0.6708
51 Q D 0.0000
52 L D 1.1749
53 S D 0.5464
23 Q E -1.5532
24 L E -0.5101
25 H E -1.1870
26 Q E -0.7675
27 Q E -1.1299
28 Q E -1.0495
29 H E -1.1945
30 Q E -1.2215
31 Q E -1.3261
32 Q E -0.8792
33 H E -0.9819
34 Q E -1.3932
35 Q E -2.0130
36 H E -2.1430
37 Q E -2.1906
38 Q E -2.0081
39 H E -1.5722
40 Q E -1.5531
41 Q E -1.6700
42 Q E -1.8097
43 Q E -1.4660
44 Q E -0.8892
45 L E -0.0888
46 H E -0.5161
47 Q E -1.1849
48 H E -1.1778
49 Q E -1.4887
50 Q E -0.9138
51 Q E -0.8393
52 L E 0.2207
53 S E -0.0563
23 Q F -1.4120
24 L F -0.3515
25 H F -1.4382
26 Q F -1.0825
27 Q F -2.1496
28 Q F -1.7298
29 H F -2.0951
30 Q F -1.7208
31 Q F -2.1608
32 Q F -1.6904
33 H F -2.0638
34 Q F -2.0087
35 Q F -2.8160
36 H F -2.5731
37 Q F -1.8917
38 Q F -1.7236
39 H F -0.9672
40 Q F -1.0259
41 Q F -1.0907
42 Q F -1.1867
43 Q F -1.2216
44 Q F -1.6897
45 L F 0.0000
46 H F -1.0211
47 Q F 0.0000
48 H F -0.7518
49 Q F 0.0000
50 Q F -0.4010
51 Q F 0.0000
52 L F 1.2260
53 S F 0.5447
23 Q G -1.5163
24 L G -0.5483
25 H G -1.1439
26 Q G -0.9136
27 Q G -1.6469
28 Q G -1.5405
29 H G -1.7728
30 Q G -1.3828
31 Q G -1.3010
32 Q G -0.7992
33 H G -1.0190
34 Q G -1.5952
35 Q G -2.3134
36 H G -2.5251
37 Q G -2.4993
38 Q G -2.0989
39 H G -1.5365
40 Q G -1.5599
41 Q G -1.6901
42 Q G -1.8218
43 Q G -1.4759
44 Q G -0.8954
45 L G -0.0794
46 H G -0.5260
47 Q G -1.1385
48 H G -1.1608
49 Q G -1.5923
50 Q G -0.9113
51 Q G -0.8995
52 L G 0.2056
53 S G -0.0632
23 Q H -1.3815
24 L H -0.2797
25 H H -1.3143
26 Q H -0.9830
27 Q H -2.0546
28 Q H -1.7324
29 H H -2.0629
30 Q H -1.7422
31 Q H -2.2997
32 Q H -1.7462
33 H H -2.2260
34 Q H -2.1389
35 Q H -3.0269
36 H H -2.7014
37 Q H -2.0128
38 Q H -1.8183
39 H H -1.1177
40 Q H -1.0780
41 Q H -1.0932
42 Q H -1.1803
43 Q H -1.2297
44 Q H -1.7000
45 L H 0.0000
46 H H -1.0744
47 Q H 0.0000
48 H H -0.8282
49 Q H 0.0000
50 Q H -0.5124
51 Q H 0.0000
52 L H 1.2347
53 S H 0.5637
23 Q I -1.5534
24 L I -0.6223
25 H I -1.1708
26 Q I -0.7536
27 Q I -1.1323
28 Q I -1.0192
29 H I -1.2851
30 Q I 0.0000
31 Q I -2.0042
32 Q I -1.3783
33 H I -1.7862
34 Q I -2.0775
35 Q I -2.8063
36 H I -2.7454
37 Q I -2.6449
38 Q I -2.0687
39 H I -1.5404
40 Q I -1.5459
41 Q I -1.6482
42 Q I -1.8109
43 Q I -1.4769
44 Q I -0.9263
45 L I -0.1653
46 H I -0.5972
47 Q I -1.2797
48 H I -1.1154
49 Q I -1.4020
50 Q I -0.8475
51 Q I -0.7782
52 L I 0.2408
53 S I -0.0484
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Laboratory of Theory of Biopolymers 2018