Chain sequence(s) |
A: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS
C: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS B: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS E: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS D: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS G: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS F: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS I: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS H: QLHQQQHHQQQHHQQHHQQHQQQQQLHQHQQQLS input PDB |
Selected Chain(s) | A,C,B,E,D,G,F,I,H |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:15) [INFO] Main: Simulation completed successfully. (00:03:17) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
23 | Q | A | -1.8541 | |
24 | L | A | -1.0964 | |
25 | H | A | -1.3952 | |
26 | Q | A | 0.0000 | |
27 | Q | A | -1.5676 | |
28 | Q | A | 0.0000 | |
29 | H | A | -1.5583 | |
30 | Q | A | 0.0000 | |
31 | Q | A | -1.6529 | |
32 | Q | A | 0.0000 | |
33 | H | A | -1.5591 | |
34 | Q | A | 0.0000 | |
35 | Q | A | -2.0683 | |
36 | H | A | -2.1916 | |
37 | Q | A | 0.0000 | |
38 | Q | A | -1.6244 | |
39 | H | A | 0.0000 | |
40 | Q | A | 0.0000 | |
41 | Q | A | 0.0000 | |
42 | Q | A | -1.4480 | |
43 | Q | A | 0.0000 | |
44 | Q | A | -1.0770 | |
45 | L | A | 0.0000 | |
46 | H | A | 0.0000 | |
47 | Q | A | 0.0000 | |
48 | H | A | 0.0000 | |
49 | Q | A | 0.0000 | |
50 | Q | A | 0.0000 | |
51 | Q | A | 0.0000 | |
52 | L | A | 0.4162 | |
53 | S | A | 0.2956 | |
23 | Q | B | -1.8181 | |
24 | L | B | -1.0333 | |
25 | H | B | -1.3808 | |
26 | Q | B | 0.0000 | |
27 | Q | B | -1.8331 | |
28 | Q | B | 0.0000 | |
29 | H | B | -1.7987 | |
30 | Q | B | 0.0000 | |
31 | Q | B | -1.6691 | |
32 | Q | B | 0.0000 | |
33 | H | B | -1.6818 | |
34 | Q | B | 0.0000 | |
35 | Q | B | -2.9019 | |
36 | H | B | -3.1128 | |
37 | Q | B | 0.0000 | |
38 | Q | B | -1.7869 | |
39 | H | B | 0.0000 | |
40 | Q | B | 0.0000 | |
41 | Q | B | 0.0000 | |
42 | Q | B | -1.4564 | |
43 | Q | B | 0.0000 | |
44 | Q | B | -1.1100 | |
45 | L | B | 0.0000 | |
46 | H | B | 0.0000 | |
47 | Q | B | 0.0000 | |
48 | H | B | 0.0000 | |
49 | Q | B | 0.0000 | |
50 | Q | B | 0.0000 | |
51 | Q | B | 0.0000 | |
52 | L | B | 0.4519 | |
53 | S | B | 0.2961 | |
23 | Q | C | -1.8262 | |
24 | L | C | -1.0368 | |
25 | H | C | -1.3014 | |
26 | Q | C | 0.0000 | |
27 | Q | C | -1.5538 | |
28 | Q | C | 0.0000 | |
29 | H | C | -1.6828 | |
30 | Q | C | 0.0000 | |
31 | Q | C | -2.0282 | |
32 | Q | C | 0.0000 | |
33 | H | C | -2.1973 | |
34 | Q | C | 0.0000 | |
35 | Q | C | -3.5275 | |
36 | H | C | -3.3884 | |
37 | Q | C | 0.0000 | |
38 | Q | C | -1.8667 | |
39 | H | C | 0.0000 | |
40 | Q | C | 0.0000 | |
41 | Q | C | 0.0000 | |
42 | Q | C | -1.4420 | |
43 | Q | C | 0.0000 | |
44 | Q | C | -1.1313 | |
45 | L | C | 0.0000 | |
46 | H | C | 0.0000 | |
47 | Q | C | 0.0000 | |
48 | H | C | 0.0000 | |
49 | Q | C | 0.0000 | |
50 | Q | C | 0.0000 | |
51 | Q | C | 0.0000 | |
52 | L | C | 0.4620 | |
53 | S | C | 0.3114 | |
23 | Q | D | -1.5034 | |
24 | L | D | -0.3702 | |
25 | H | D | -1.5005 | |
26 | Q | D | -1.0820 | |
27 | Q | D | -2.0896 | |
28 | Q | D | -1.7265 | |
29 | H | D | -2.0275 | |
30 | Q | D | -1.7587 | |
31 | Q | D | -2.1622 | |
32 | Q | D | -1.6340 | |
33 | H | D | -1.8747 | |
34 | Q | D | -1.7067 | |
35 | Q | D | -2.4104 | |
36 | H | D | -2.1888 | |
37 | Q | D | -1.6891 | |
38 | Q | D | -1.7406 | |
39 | H | D | -1.0128 | |
40 | Q | D | -1.0431 | |
41 | Q | D | -1.1027 | |
42 | Q | D | -1.1853 | |
43 | Q | D | -1.2021 | |
44 | Q | D | -1.6402 | |
45 | L | D | 0.0000 | |
46 | H | D | -0.8983 | |
47 | Q | D | 0.0000 | |
48 | H | D | -1.0153 | |
49 | Q | D | 0.0000 | |
50 | Q | D | -0.6708 | |
51 | Q | D | 0.0000 | |
52 | L | D | 1.1749 | |
53 | S | D | 0.5464 | |
23 | Q | E | -1.5532 | |
24 | L | E | -0.5101 | |
25 | H | E | -1.1870 | |
26 | Q | E | -0.7675 | |
27 | Q | E | -1.1299 | |
28 | Q | E | -1.0495 | |
29 | H | E | -1.1945 | |
30 | Q | E | -1.2215 | |
31 | Q | E | -1.3261 | |
32 | Q | E | -0.8792 | |
33 | H | E | -0.9819 | |
34 | Q | E | -1.3932 | |
35 | Q | E | -2.0130 | |
36 | H | E | -2.1430 | |
37 | Q | E | -2.1906 | |
38 | Q | E | -2.0081 | |
39 | H | E | -1.5722 | |
40 | Q | E | -1.5531 | |
41 | Q | E | -1.6700 | |
42 | Q | E | -1.8097 | |
43 | Q | E | -1.4660 | |
44 | Q | E | -0.8892 | |
45 | L | E | -0.0888 | |
46 | H | E | -0.5161 | |
47 | Q | E | -1.1849 | |
48 | H | E | -1.1778 | |
49 | Q | E | -1.4887 | |
50 | Q | E | -0.9138 | |
51 | Q | E | -0.8393 | |
52 | L | E | 0.2207 | |
53 | S | E | -0.0563 | |
23 | Q | F | -1.4120 | |
24 | L | F | -0.3515 | |
25 | H | F | -1.4382 | |
26 | Q | F | -1.0825 | |
27 | Q | F | -2.1496 | |
28 | Q | F | -1.7298 | |
29 | H | F | -2.0951 | |
30 | Q | F | -1.7208 | |
31 | Q | F | -2.1608 | |
32 | Q | F | -1.6904 | |
33 | H | F | -2.0638 | |
34 | Q | F | -2.0087 | |
35 | Q | F | -2.8160 | |
36 | H | F | -2.5731 | |
37 | Q | F | -1.8917 | |
38 | Q | F | -1.7236 | |
39 | H | F | -0.9672 | |
40 | Q | F | -1.0259 | |
41 | Q | F | -1.0907 | |
42 | Q | F | -1.1867 | |
43 | Q | F | -1.2216 | |
44 | Q | F | -1.6897 | |
45 | L | F | 0.0000 | |
46 | H | F | -1.0211 | |
47 | Q | F | 0.0000 | |
48 | H | F | -0.7518 | |
49 | Q | F | 0.0000 | |
50 | Q | F | -0.4010 | |
51 | Q | F | 0.0000 | |
52 | L | F | 1.2260 | |
53 | S | F | 0.5447 | |
23 | Q | G | -1.5163 | |
24 | L | G | -0.5483 | |
25 | H | G | -1.1439 | |
26 | Q | G | -0.9136 | |
27 | Q | G | -1.6469 | |
28 | Q | G | -1.5405 | |
29 | H | G | -1.7728 | |
30 | Q | G | -1.3828 | |
31 | Q | G | -1.3010 | |
32 | Q | G | -0.7992 | |
33 | H | G | -1.0190 | |
34 | Q | G | -1.5952 | |
35 | Q | G | -2.3134 | |
36 | H | G | -2.5251 | |
37 | Q | G | -2.4993 | |
38 | Q | G | -2.0989 | |
39 | H | G | -1.5365 | |
40 | Q | G | -1.5599 | |
41 | Q | G | -1.6901 | |
42 | Q | G | -1.8218 | |
43 | Q | G | -1.4759 | |
44 | Q | G | -0.8954 | |
45 | L | G | -0.0794 | |
46 | H | G | -0.5260 | |
47 | Q | G | -1.1385 | |
48 | H | G | -1.1608 | |
49 | Q | G | -1.5923 | |
50 | Q | G | -0.9113 | |
51 | Q | G | -0.8995 | |
52 | L | G | 0.2056 | |
53 | S | G | -0.0632 | |
23 | Q | H | -1.3815 | |
24 | L | H | -0.2797 | |
25 | H | H | -1.3143 | |
26 | Q | H | -0.9830 | |
27 | Q | H | -2.0546 | |
28 | Q | H | -1.7324 | |
29 | H | H | -2.0629 | |
30 | Q | H | -1.7422 | |
31 | Q | H | -2.2997 | |
32 | Q | H | -1.7462 | |
33 | H | H | -2.2260 | |
34 | Q | H | -2.1389 | |
35 | Q | H | -3.0269 | |
36 | H | H | -2.7014 | |
37 | Q | H | -2.0128 | |
38 | Q | H | -1.8183 | |
39 | H | H | -1.1177 | |
40 | Q | H | -1.0780 | |
41 | Q | H | -1.0932 | |
42 | Q | H | -1.1803 | |
43 | Q | H | -1.2297 | |
44 | Q | H | -1.7000 | |
45 | L | H | 0.0000 | |
46 | H | H | -1.0744 | |
47 | Q | H | 0.0000 | |
48 | H | H | -0.8282 | |
49 | Q | H | 0.0000 | |
50 | Q | H | -0.5124 | |
51 | Q | H | 0.0000 | |
52 | L | H | 1.2347 | |
53 | S | H | 0.5637 | |
23 | Q | I | -1.5534 | |
24 | L | I | -0.6223 | |
25 | H | I | -1.1708 | |
26 | Q | I | -0.7536 | |
27 | Q | I | -1.1323 | |
28 | Q | I | -1.0192 | |
29 | H | I | -1.2851 | |
30 | Q | I | 0.0000 | |
31 | Q | I | -2.0042 | |
32 | Q | I | -1.3783 | |
33 | H | I | -1.7862 | |
34 | Q | I | -2.0775 | |
35 | Q | I | -2.8063 | |
36 | H | I | -2.7454 | |
37 | Q | I | -2.6449 | |
38 | Q | I | -2.0687 | |
39 | H | I | -1.5404 | |
40 | Q | I | -1.5459 | |
41 | Q | I | -1.6482 | |
42 | Q | I | -1.8109 | |
43 | Q | I | -1.4769 | |
44 | Q | I | -0.9263 | |
45 | L | I | -0.1653 | |
46 | H | I | -0.5972 | |
47 | Q | I | -1.2797 | |
48 | H | I | -1.1154 | |
49 | Q | I | -1.4020 | |
50 | Q | I | -0.8475 | |
51 | Q | I | -0.7782 | |
52 | L | I | 0.2408 | |
53 | S | I | -0.0484 |