| Chain sequence(s) |
A: QVQLVESGGALVQPGGSLRLSCAASSSDFSRNALRWYRQAPGKEREWVCGINWTGSGYAYEDSVKGRFTCSRDDARNTVYLQLNSLKPEDTAVYYCAPLACSNCFPYKHYVYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:40)
[INFO] Main: Simulation completed successfully. (00:01:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.0987 | |
| 2 | V | A | -0.0212 | |
| 3 | Q | A | -0.8494 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.7977 | |
| 6 | E | A | -0.1755 | |
| 7 | S | A | -0.7006 | |
| 8 | G | A | -1.1435 | |
| 9 | G | A | -0.6939 | |
| 10 | A | A | 0.0556 | |
| 11 | L | A | 1.1517 | |
| 12 | V | A | 0.0022 | |
| 13 | Q | A | -1.3711 | |
| 14 | P | A | -1.6713 | |
| 15 | G | A | -1.4423 | |
| 16 | G | A | -0.9554 | |
| 17 | S | A | -1.3066 | |
| 18 | L | A | -1.0037 | |
| 19 | R | A | -2.2185 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4928 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.4374 | |
| 24 | A | A | -0.5916 | |
| 25 | S | A | -0.7387 | |
| 26 | S | A | -0.8012 | |
| 27 | S | A | -1.4030 | |
| 28 | D | A | -1.9885 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -2.0588 | |
| 31 | R | A | -2.2472 | |
| 32 | N | A | -1.0385 | |
| 33 | A | A | -0.5581 | |
| 34 | L | A | 0.0000 | |
| 35 | R | A | -0.2184 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.7922 | |
| 38 | R | A | -1.4959 | |
| 39 | Q | A | -2.1904 | |
| 40 | A | A | -2.0810 | |
| 41 | P | A | -1.3854 | |
| 42 | G | A | -1.9329 | |
| 43 | K | A | -3.4155 | |
| 44 | E | A | -3.6344 | |
| 45 | R | A | -2.8939 | |
| 46 | E | A | -2.6012 | |
| 47 | W | A | -1.0507 | |
| 48 | V | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | G | A | 0.0482 | |
| 51 | I | A | 0.0000 | |
| 52 | N | A | -0.5338 | |
| 53 | W | A | -0.5753 | |
| 54 | T | A | -0.4921 | |
| 55 | G | A | -0.3350 | |
| 56 | S | A | -0.1447 | |
| 57 | G | A | 0.0689 | |
| 58 | Y | A | 0.6259 | |
| 59 | A | A | -0.0980 | |
| 60 | Y | A | -0.8998 | |
| 61 | E | A | -1.9852 | |
| 62 | D | A | -2.7239 | |
| 63 | S | A | -1.8198 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.7606 | |
| 66 | G | A | -1.8159 | |
| 67 | R | A | -1.3997 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.8157 | |
| 70 | C | A | 0.0000 | |
| 71 | S | A | -0.5290 | |
| 72 | R | A | -1.1888 | |
| 73 | D | A | -2.0940 | |
| 74 | D | A | -2.5363 | |
| 75 | A | A | -1.7516 | |
| 76 | R | A | -2.6186 | |
| 77 | N | A | -2.0732 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.7883 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.5047 | |
| 83 | L | A | 0.0000 | |
| 84 | N | A | -1.4244 | |
| 85 | S | A | -1.2772 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.5970 | |
| 88 | P | A | -2.0627 | |
| 89 | E | A | -2.4180 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9381 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.4576 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.0000 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | P | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | A | A | -0.0850 | |
| 101 | C | A | 0.1338 | |
| 102 | S | A | -0.4552 | |
| 103 | N | A | -0.3862 | |
| 104 | C | A | 0.5463 | |
| 105 | F | A | 1.6603 | |
| 106 | P | A | 0.7850 | |
| 107 | Y | A | 0.6973 | |
| 108 | K | A | -0.9539 | |
| 109 | H | A | -0.7424 | |
| 110 | Y | A | 0.5561 | |
| 111 | V | A | 1.8102 | |
| 112 | Y | A | 0.9689 | |
| 113 | W | A | 0.7813 | |
| 114 | G | A | -0.1445 | |
| 115 | Q | A | -1.0593 | |
| 116 | G | A | -0.6205 | |
| 117 | T | A | 0.0000 | |
| 118 | Q | A | -1.0911 | |
| 119 | V | A | 0.0000 | |
| 120 | T | A | -0.2237 | |
| 121 | V | A | 0.0000 | |
| 122 | S | A | -0.7047 | |
| 123 | S | A | -0.6324 |