Project name: query_structure

Status: done

Started: 2026-03-17 00:36:41
Settings
Chain sequence(s) A: QVQLVESGGALVQPGGSLRLSCAASSSDFSRNALRWYRQAPGKEREWVCGINWTGSGYAYEDSVKGRFTCSRDDARNTVYLQLNSLKPEDTAVYYCAPLACSNCFPYKHYVYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:41)
Show buried residues

Minimal score value
-3.6344
Maximal score value
1.8102
Average score
-0.7298
Total score value
-89.7679

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.0987
2 V A -0.0212
3 Q A -0.8494
4 L A 0.0000
5 V A 0.7977
6 E A -0.1755
7 S A -0.7006
8 G A -1.1435
9 G A -0.6939
10 A A 0.0556
11 L A 1.1517
12 V A 0.0022
13 Q A -1.3711
14 P A -1.6713
15 G A -1.4423
16 G A -0.9554
17 S A -1.3066
18 L A -1.0037
19 R A -2.2185
20 L A 0.0000
21 S A -0.4928
22 C A 0.0000
23 A A -0.4374
24 A A -0.5916
25 S A -0.7387
26 S A -0.8012
27 S A -1.4030
28 D A -1.9885
29 F A 0.0000
30 S A -2.0588
31 R A -2.2472
32 N A -1.0385
33 A A -0.5581
34 L A 0.0000
35 R A -0.2184
36 W A 0.0000
37 Y A -0.7922
38 R A -1.4959
39 Q A -2.1904
40 A A -2.0810
41 P A -1.3854
42 G A -1.9329
43 K A -3.4155
44 E A -3.6344
45 R A -2.8939
46 E A -2.6012
47 W A -1.0507
48 V A 0.0000
49 C A 0.0000
50 G A 0.0482
51 I A 0.0000
52 N A -0.5338
53 W A -0.5753
54 T A -0.4921
55 G A -0.3350
56 S A -0.1447
57 G A 0.0689
58 Y A 0.6259
59 A A -0.0980
60 Y A -0.8998
61 E A -1.9852
62 D A -2.7239
63 S A -1.8198
64 V A 0.0000
65 K A -2.7606
66 G A -1.8159
67 R A -1.3997
68 F A 0.0000
69 T A -0.8157
70 C A 0.0000
71 S A -0.5290
72 R A -1.1888
73 D A -2.0940
74 D A -2.5363
75 A A -1.7516
76 R A -2.6186
77 N A -2.0732
78 T A 0.0000
79 V A 0.0000
80 Y A -0.7883
81 L A 0.0000
82 Q A -1.5047
83 L A 0.0000
84 N A -1.4244
85 S A -1.2772
86 L A 0.0000
87 K A -2.5970
88 P A -2.0627
89 E A -2.4180
90 D A 0.0000
91 T A -0.9381
92 A A 0.0000
93 V A -0.4576
94 Y A 0.0000
95 Y A 0.0000
96 C A 0.0000
97 A A 0.0000
98 P A 0.0000
99 L A 0.0000
100 A A -0.0850
101 C A 0.1338
102 S A -0.4552
103 N A -0.3862
104 C A 0.5463
105 F A 1.6603
106 P A 0.7850
107 Y A 0.6973
108 K A -0.9539
109 H A -0.7424
110 Y A 0.5561
111 V A 1.8102
112 Y A 0.9689
113 W A 0.7813
114 G A -0.1445
115 Q A -1.0593
116 G A -0.6205
117 T A 0.0000
118 Q A -1.0911
119 V A 0.0000
120 T A -0.2237
121 V A 0.0000
122 S A -0.7047
123 S A -0.6324
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Laboratory of Theory of Biopolymers 2018