Project name: WT_1X69

Status: done

Started: 2024-07-08 15:15:36
Settings
Chain sequence(s) A: GSSGSSGTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQSGPSSG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:28)
Show buried residues

Minimal score value
-2.9812
Maximal score value
0.418
Average score
-0.9734
Total score value
-76.8954

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6144
2 S A -0.6387
3 S A -0.7281
4 G A -0.8525
5 S A -0.7470
6 S A -0.8944
7 G A -0.7044
8 T A -0.3131
9 Y A -0.0966
10 D A -2.0379
11 E A -2.1919
12 Y A -1.2247
13 E A -2.7066
14 N A -2.6168
15 D A -2.2148
16 L A -0.2174
17 G A -0.5462
18 I A 0.2127
19 T A -0.0537
20 A A 0.0000
21 V A -0.6780
22 A A 0.0000
23 L A -0.1624
24 Y A 0.0185
25 D A -2.1278
26 Y A -1.2622
27 Q A -1.8651
28 A A -1.4469
29 A A -1.1790
30 G A -1.9956
31 D A -2.9812
32 D A -2.9034
33 E A -1.9943
34 I A 0.0000
35 S A -1.8678
36 F A 0.0000
37 D A -2.7478
38 P A -1.5196
39 D A -1.8711
40 D A -1.0259
41 I A 0.4180
42 I A 0.0000
43 T A 0.2527
44 N A -0.2512
45 I A 0.0000
46 E A -0.8187
47 M A 0.2027
48 I A 0.3440
49 D A -1.5103
50 D A -2.0955
51 G A -1.3283
52 W A -0.6821
53 W A 0.0000
54 R A -0.6499
55 G A 0.0000
56 V A -0.1062
57 C A 0.0000
58 K A -2.2088
59 G A -1.7705
60 R A -2.3185
61 Y A -0.7942
62 G A 0.0000
63 L A -0.6497
64 F A 0.0000
65 P A 0.0000
66 A A -0.9694
67 N A -1.1596
68 Y A -0.2053
69 V A 0.0000
70 E A -1.8653
71 L A -1.3849
72 R A -2.2253
73 Q A -2.3732
74 S A -1.5537
75 G A -1.1671
76 P A -0.9671
77 S A -0.6984
78 S A -0.7016
79 G A -0.8619
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Laboratory of Theory of Biopolymers 2018