| Chain sequence(s) |
A: GSSGSSGTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQSGPSSG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6144 | |
| 2 | S | A | -0.6387 | |
| 3 | S | A | -0.7281 | |
| 4 | G | A | -0.8525 | |
| 5 | S | A | -0.7470 | |
| 6 | S | A | -0.8944 | |
| 7 | G | A | -0.7044 | |
| 8 | T | A | -0.3131 | |
| 9 | Y | A | -0.0966 | |
| 10 | D | A | -2.0379 | |
| 11 | E | A | -2.1919 | |
| 12 | Y | A | -1.2247 | |
| 13 | E | A | -2.7066 | |
| 14 | N | A | -2.6168 | |
| 15 | D | A | -2.2148 | |
| 16 | L | A | -0.2174 | |
| 17 | G | A | -0.5462 | |
| 18 | I | A | 0.2127 | |
| 19 | T | A | -0.0537 | |
| 20 | A | A | 0.0000 | |
| 21 | V | A | -0.6780 | |
| 22 | A | A | 0.0000 | |
| 23 | L | A | -0.1624 | |
| 24 | Y | A | 0.0185 | |
| 25 | D | A | -2.1278 | |
| 26 | Y | A | -1.2622 | |
| 27 | Q | A | -1.8651 | |
| 28 | A | A | -1.4469 | |
| 29 | A | A | -1.1790 | |
| 30 | G | A | -1.9956 | |
| 31 | D | A | -2.9812 | |
| 32 | D | A | -2.9034 | |
| 33 | E | A | -1.9943 | |
| 34 | I | A | 0.0000 | |
| 35 | S | A | -1.8678 | |
| 36 | F | A | 0.0000 | |
| 37 | D | A | -2.7478 | |
| 38 | P | A | -1.5196 | |
| 39 | D | A | -1.8711 | |
| 40 | D | A | -1.0259 | |
| 41 | I | A | 0.4180 | |
| 42 | I | A | 0.0000 | |
| 43 | T | A | 0.2527 | |
| 44 | N | A | -0.2512 | |
| 45 | I | A | 0.0000 | |
| 46 | E | A | -0.8187 | |
| 47 | M | A | 0.2027 | |
| 48 | I | A | 0.3440 | |
| 49 | D | A | -1.5103 | |
| 50 | D | A | -2.0955 | |
| 51 | G | A | -1.3283 | |
| 52 | W | A | -0.6821 | |
| 53 | W | A | 0.0000 | |
| 54 | R | A | -0.6499 | |
| 55 | G | A | 0.0000 | |
| 56 | V | A | -0.1062 | |
| 57 | C | A | 0.0000 | |
| 58 | K | A | -2.2088 | |
| 59 | G | A | -1.7705 | |
| 60 | R | A | -2.3185 | |
| 61 | Y | A | -0.7942 | |
| 62 | G | A | 0.0000 | |
| 63 | L | A | -0.6497 | |
| 64 | F | A | 0.0000 | |
| 65 | P | A | 0.0000 | |
| 66 | A | A | -0.9694 | |
| 67 | N | A | -1.1596 | |
| 68 | Y | A | -0.2053 | |
| 69 | V | A | 0.0000 | |
| 70 | E | A | -1.8653 | |
| 71 | L | A | -1.3849 | |
| 72 | R | A | -2.2253 | |
| 73 | Q | A | -2.3732 | |
| 74 | S | A | -1.5537 | |
| 75 | G | A | -1.1671 | |
| 76 | P | A | -0.9671 | |
| 77 | S | A | -0.6984 | |
| 78 | S | A | -0.7016 | |
| 79 | G | A | -0.8619 |