| Chain sequence(s) |
B: SIELKYKFKGTTGVIGLINHPELSSFVIDGFGNKVKVFVNAKSGIGKIELEVRTPSLEEPVRAESEITIKNGEKTVKVEAEAEVGDLESDEVEVTITLYPG
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LQ17B,VQ14B |
| Energy difference between WT (input) and mutated protein (by FoldX) | -0.034503 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:54)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:05)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:04)
[INFO] Main: Simulation completed successfully. (00:02:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.0130 | |
| 2 | I | B | 0.4602 | |
| 3 | E | B | -1.6394 | |
| 4 | L | B | -0.4953 | |
| 5 | K | B | -1.6336 | |
| 6 | Y | B | -0.4066 | |
| 7 | K | B | -1.6224 | |
| 8 | F | B | -0.2491 | |
| 9 | K | B | -1.7982 | |
| 10 | G | B | 0.0000 | |
| 11 | T | B | -0.0522 | |
| 12 | T | B | -0.0999 | |
| 13 | G | B | -0.3530 | |
| 14 | Q | B | -1.1746 | mutated: VQ14B |
| 15 | I | B | 0.0262 | |
| 16 | G | B | -0.2516 | |
| 17 | Q | B | -1.1201 | mutated: LQ17B |
| 18 | I | B | -0.1285 | |
| 19 | N | B | -1.2324 | |
| 20 | H | B | -0.3987 | |
| 21 | P | B | -0.4010 | |
| 22 | E | B | -0.7137 | |
| 23 | L | B | 0.0000 | |
| 24 | S | B | -0.2331 | |
| 25 | S | B | -0.1964 | |
| 26 | F | B | 0.0000 | |
| 27 | V | B | 0.1420 | |
| 28 | I | B | 0.0000 | |
| 29 | D | B | 0.0000 | |
| 30 | G | B | 0.0000 | |
| 31 | F | B | 1.3250 | |
| 32 | G | B | -0.3997 | |
| 33 | N | B | -1.3385 | |
| 34 | K | B | -1.1358 | |
| 35 | V | B | 0.0000 | |
| 36 | K | B | -0.6901 | |
| 37 | V | B | 0.0000 | |
| 38 | F | B | 0.2869 | |
| 39 | V | B | 0.0000 | |
| 40 | N | B | -0.4700 | |
| 41 | A | B | -0.2898 | |
| 42 | K | B | -1.2556 | |
| 43 | S | B | -0.5169 | |
| 44 | G | B | -0.5039 | |
| 45 | I | B | 0.0000 | |
| 46 | G | B | -0.3239 | |
| 47 | K | B | -0.7099 | |
| 48 | I | B | 0.0000 | |
| 49 | E | B | -0.9458 | |
| 50 | L | B | 0.0000 | |
| 51 | E | B | -0.8230 | |
| 52 | V | B | 0.0000 | |
| 53 | R | B | -1.5467 | |
| 54 | T | B | 0.0000 | |
| 55 | P | B | -0.2825 | |
| 56 | S | B | -0.1532 | |
| 57 | L | B | -0.1007 | |
| 58 | E | B | -2.1040 | |
| 59 | E | B | -2.1589 | |
| 60 | P | B | -0.5085 | |
| 61 | V | B | 0.0374 | |
| 62 | R | B | -1.8445 | |
| 63 | A | B | -0.6699 | |
| 64 | E | B | -1.9095 | |
| 65 | S | B | -0.7046 | |
| 66 | E | B | -1.6446 | |
| 67 | I | B | 0.6465 | |
| 68 | T | B | 0.4878 | |
| 69 | I | B | 1.3334 | |
| 70 | K | B | -1.5776 | |
| 71 | N | B | -1.6548 | |
| 72 | G | B | -1.0152 | |
| 73 | E | B | -2.2109 | |
| 74 | K | B | -1.8070 | |
| 75 | T | B | -0.3253 | |
| 76 | V | B | 0.0000 | |
| 77 | K | B | -0.6299 | |
| 78 | V | B | 0.0000 | |
| 79 | E | B | -1.4864 | |
| 80 | A | B | 0.0000 | |
| 81 | E | B | -1.8797 | |
| 82 | A | B | 0.0000 | |
| 83 | E | B | -1.4147 | |
| 84 | V | B | 0.0000 | |
| 85 | G | B | -0.7393 | |
| 86 | D | B | -1.8287 | |
| 87 | L | B | 0.0000 | |
| 88 | E | B | -1.8592 | |
| 89 | S | B | -0.5894 | |
| 90 | D | B | -0.5540 | |
| 91 | E | B | -1.8596 | |
| 92 | V | B | 0.0000 | |
| 93 | E | B | -0.6844 | |
| 94 | V | B | 0.0000 | |
| 95 | T | B | -0.2751 | |
| 96 | I | B | 0.0000 | |
| 97 | T | B | -0.3179 | |
| 98 | L | B | 0.0000 | |
| 99 | Y | B | 0.3826 | |
| 100 | P | B | -0.2473 | |
| 101 | G | B | -0.5278 |