| Chain sequence(s) |
A: VQLTESGGGLFSSSGDSITLTCKASGRTFSSAYDIAWFAQKPGEPRRFVAAISWSGNSTYYAEEWRGLVQISRDNSANTAYLKIVIDPDKDGWLEAKERAWIEATYFCAARKPMYRVDISKGQNYDYWGAGTVVTT
D: DTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYS input PDB |
| Selected Chain(s) | A,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:22)
[INFO] Main: Simulation completed successfully. (00:03:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 4 | V | A | -0.0621 | |
| 5 | Q | A | -0.8063 | |
| 6 | L | A | 0.0000 | |
| 7 | T | A | -0.6183 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.2522 | |
| 10 | G | A | -0.2765 | |
| 11 | G | A | 0.4252 | |
| 12 | G | A | 0.8461 | |
| 13 | L | A | 1.5463 | |
| 14 | F | A | 0.0000 | |
| 15 | S | A | -0.2189 | |
| 16 | S | A | -0.6937 | |
| 17 | G | A | -1.3800 | |
| 18 | D | A | -2.1971 | |
| 19 | S | A | -1.2946 | |
| 20 | I | A | -0.7850 | |
| 21 | T | A | -0.7819 | |
| 22 | L | A | 0.0000 | |
| 23 | T | A | -0.5267 | |
| 24 | C | A | 0.0000 | |
| 25 | K | A | -1.1766 | |
| 26 | A | A | -1.0691 | |
| 27 | S | A | -1.0278 | |
| 28 | G | A | -1.2457 | |
| 29 | R | A | -2.0379 | |
| 30 | T | A | -0.7640 | |
| 31 | F | A | 0.0000 | |
| 32 | S | A | -0.7242 | |
| 33 | A | A | 0.0000 | |
| 34 | Y | A | 0.0000 | |
| 35 | D | A | 0.0000 | |
| 36 | I | A | 0.0000 | |
| 37 | A | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | A | A | 0.0000 | |
| 41 | Q | A | -2.2597 | |
| 42 | K | A | -1.7903 | |
| 43 | P | A | -1.5489 | |
| 44 | G | A | -1.8381 | |
| 45 | E | A | -3.0976 | |
| 46 | P | A | -2.7093 | |
| 47 | R | A | -3.4093 | |
| 48 | R | A | -3.2406 | |
| 49 | F | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | W | A | -0.3533 | |
| 56 | S | A | -0.7453 | |
| 57 | G | A | -1.0587 | |
| 58 | N | A | -1.4590 | |
| 59 | S | A | -0.6944 | |
| 60 | T | A | -0.1678 | |
| 61 | Y | A | 0.3024 | |
| 62 | Y | A | -0.7912 | |
| 63 | A | A | -1.8724 | |
| 64 | E | A | -2.9380 | |
| 65 | E | A | -2.0548 | |
| 66 | W | A | 0.0000 | |
| 67 | R | A | -2.8288 | |
| 68 | G | A | -1.9997 | |
| 69 | L | A | -1.5284 | |
| 70 | V | A | 0.0000 | |
| 71 | Q | A | -1.7408 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.9936 | |
| 74 | R | A | -0.8690 | |
| 75 | D | A | -1.2837 | |
| 76 | N | A | -1.2405 | |
| 77 | S | A | -0.9307 | |
| 78 | A | A | -0.8887 | |
| 79 | N | A | -1.2646 | |
| 80 | T | A | -0.8263 | |
| 81 | A | A | 0.0000 | |
| 82 | Y | A | -0.5984 | |
| 83 | L | A | 0.0000 | |
| 84 | K | A | -1.7601 | |
| 85 | I | A | 0.0000 | |
| 86 | V | A | -1.1930 | |
| 87 | I | A | 0.0000 | |
| 88 | D | A | -2.0115 | |
| 89 | P | A | -2.3683 | |
| 90 | D | A | -3.2189 | |
| 91 | K | A | -3.5855 | |
| 92 | D | A | -3.0802 | |
| 93 | G | A | -1.5730 | |
| 94 | W | A | -0.1789 | |
| 95 | L | A | -0.9252 | |
| 96 | E | A | -0.8619 | |
| 97 | A | A | -0.9288 | |
| 98 | K | A | -1.9336 | |
| 99 | E | A | -1.4826 | |
| 100 | R | A | -1.2095 | |
| 101 | A | A | -0.8531 | |
| 102 | W | A | -0.5641 | |
| 103 | I | A | 0.0000 | |
| 104 | E | A | -0.1668 | |
| 105 | A | A | 0.0000 | |
| 106 | T | A | 0.1512 | |
| 107 | Y | A | 0.0000 | |
| 108 | F | A | 0.0000 | |
| 109 | C | A | 0.0000 | |
| 110 | A | A | 0.0000 | |
| 111 | A | A | 0.0000 | |
| 112 | R | A | 0.0000 | |
| 113 | K | A | -0.8724 | |
| 114 | P | A | 0.0000 | |
| 115 | M | A | -0.8254 | |
| 116 | Y | A | -1.1108 | |
| 117 | R | A | -1.8782 | |
| 118 | V | A | 0.0000 | |
| 119 | D | A | 0.0000 | |
| 120 | I | A | 0.0000 | |
| 121 | S | A | -1.1841 | |
| 122 | K | A | -1.9354 | |
| 123 | G | A | -1.8473 | |
| 124 | Q | A | -1.8518 | |
| 125 | N | A | -1.4599 | |
| 126 | Y | A | 0.0000 | |
| 127 | D | A | -1.5431 | |
| 128 | Y | A | -0.4683 | |
| 129 | W | A | 0.0688 | |
| 130 | G | A | 0.0000 | |
| 131 | A | A | 0.1203 | |
| 132 | G | A | 0.3024 | |
| 133 | T | A | 0.5941 | |
| 134 | V | A | 1.6164 | |
| 135 | V | A | 0.0000 | |
| 136 | T | A | 0.6613 | |
| 137 | T | A | 0.0889 | |
| 8 | D | D | -2.3257 | |
| 9 | T | D | -1.4144 | |
| 10 | Q | D | -1.5262 | |
| 11 | I | D | -0.7075 | |
| 12 | F | D | -0.5605 | |
| 13 | E | D | -1.3264 | |
| 14 | D | D | -2.5895 | |
| 15 | P | D | -2.1643 | |
| 16 | R | D | -2.6356 | |
| 17 | E | D | -1.9896 | |
| 18 | F | D | 0.0000 | |
| 19 | L | D | 0.0000 | |
| 20 | S | D | -0.8741 | |
| 21 | H | D | 0.0000 | |
| 22 | L | D | 0.0000 | |
| 23 | E | D | -1.3810 | |
| 24 | E | D | -0.9825 | |
| 25 | Y | D | 0.0000 | |
| 26 | L | D | 0.0000 | |
| 27 | R | D | -2.2667 | |
| 28 | Q | D | -0.9924 | |
| 29 | V | D | 0.5871 | |
| 30 | G | D | -0.7185 | |
| 31 | G | D | -1.1437 | |
| 32 | S | D | -1.8076 | |
| 33 | E | D | -2.9802 | |
| 34 | E | D | -2.4215 | |
| 35 | Y | D | -0.6979 | |
| 36 | W | D | 0.0000 | |
| 37 | L | D | -0.8104 | |
| 38 | S | D | -0.5821 | |
| 39 | Q | D | -0.8485 | |
| 40 | I | D | 0.0000 | |
| 41 | Q | D | -2.3937 | |
| 42 | N | D | -2.0272 | |
| 43 | H | D | 0.0000 | |
| 44 | M | D | 0.0000 | |
| 45 | N | D | -1.9832 | |
| 46 | G | D | -1.6160 | |
| 47 | P | D | -1.5322 | |
| 48 | A | D | 0.0000 | |
| 49 | K | D | -2.7405 | |
| 50 | K | D | -2.6355 | |
| 51 | W | D | -1.1366 | |
| 52 | W | D | 0.0000 | |
| 53 | E | D | -2.1830 | |
| 54 | F | D | 0.0894 | |
| 55 | K | D | -0.7613 | |
| 56 | Q | D | -1.4850 | |
| 57 | G | D | -1.1278 | |
| 58 | S | D | -1.0674 | |
| 59 | V | D | 0.0000 | |
| 60 | K | D | -2.1472 | |
| 61 | N | D | -1.6867 | |
| 62 | W | D | 0.0000 | |
| 63 | V | D | 0.2200 | |
| 64 | E | D | -1.5393 | |
| 65 | F | D | 0.0000 | |
| 66 | K | D | -1.5776 | |
| 67 | K | D | -2.2829 | |
| 68 | E | D | -1.9443 | |
| 69 | F | D | 0.0000 | |
| 70 | L | D | -1.6438 | |
| 71 | Q | D | -1.5697 | |
| 72 | Y | D | -0.4548 | |
| 73 | S | D | -0.9097 |