Project name: 2510-6.pdb

Status: done

Started: 2026-03-11 09:49:42
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASRFTFSIYYMSWVRQAPGKGPEWVSSISSDGRLTRYVDSVKGRFTISRDNAKNTLYLQMNSLKAEDTALYYCARGSDGSGLRGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:59)
Show buried residues

Minimal score value
-2.7849
Maximal score value
1.9162
Average score
-0.722
Total score value
-83.7483

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5126
2 V H -1.0088
3 Q H -0.9169
4 L H 0.0000
5 V H 0.8999
6 E H 0.0000
7 S H -0.4746
8 G H -1.0652
9 G H -0.6171
11 G H 0.0793
12 L H 1.0904
13 V H -0.0019
14 Q H -1.3404
15 P H -1.4691
16 G H -1.4866
17 G H -1.0582
18 S H -1.3111
19 L H -0.8325
20 R H -1.8799
21 L H 0.0000
22 S H -0.3009
23 C H 0.0000
24 A H -0.0301
25 A H -0.8307
26 S H -1.1287
27 R H -2.2203
28 F H -0.7527
29 T H 0.1127
30 F H 0.0000
35 S H 0.3288
36 I H 1.9162
37 Y H 1.1261
38 Y H 0.2319
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0803
43 R H 0.0000
44 Q H -1.0945
45 A H 0.0000
46 P H -0.9033
47 G H -1.1957
48 K H -1.6053
49 G H -1.3417
50 P H -0.9549
51 E H -0.5632
52 W H 0.2563
53 V H 0.0000
54 S H 0.0000
55 S H 0.0000
56 I H 0.0000
57 S H -0.6147
58 S H -0.4379
59 D H -1.9838
62 G H -1.7418
63 R H -1.9933
64 L H -0.6835
65 T H -0.8195
66 R H -1.7138
67 Y H -1.4122
68 V H -1.2340
69 D H -2.5297
70 S H -1.7799
71 V H 0.0000
72 K H -2.7849
74 G H -1.7755
75 R H -1.7686
76 F H 0.0000
77 T H -1.0775
78 I H 0.0000
79 S H -0.7424
80 R H -1.4705
81 D H -1.8082
82 N H -1.8990
83 A H -1.4025
84 K H -2.3078
85 N H -2.0091
86 T H -0.9895
87 L H 0.0000
88 Y H -0.5279
89 L H 0.0000
90 Q H -1.1984
91 M H 0.0000
92 N H -1.7208
93 S H -1.4610
94 L H 0.0000
95 K H -2.3377
96 A H -1.7045
97 E H -2.2112
98 D H 0.0000
99 T H -0.8041
100 A H 0.0000
101 L H -0.3305
102 Y H 0.0000
103 Y H -0.3150
104 C H 0.0000
105 A H 0.0000
106 R H -0.6222
107 G H 0.0000
108 S H -1.2036
109 D H -2.2739
114 G H -1.5372
115 S H -0.9673
116 G H -0.7248
117 L H 0.1908
118 R H -1.0934
119 G H -0.5644
120 Q H -1.1299
121 G H 0.0000
122 T H -0.5162
123 Q H -0.8178
124 V H 0.0000
125 T H -0.1765
126 V H 0.0000
127 S H -0.4624
128 S H -0.4838
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Laboratory of Theory of Biopolymers 2018