| Chain sequence(s) |
A: LSCGQVNSALAPCITFLTKGGVPSGPCCSGVRGLLGAAKTTADRQAACNCLKAAAGSLHGLNQGNAAALPGRCGVSIPYKISTSTNCATIKF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | -0.1321 | |
| 2 | S | A | -0.4051 | |
| 3 | C | A | -0.5299 | |
| 4 | G | A | -1.1845 | |
| 5 | Q | A | -1.5353 | |
| 6 | V | A | 0.0000 | |
| 7 | N | A | -1.3991 | |
| 8 | S | A | -1.0943 | |
| 9 | A | A | -1.0121 | |
| 10 | L | A | -0.2623 | |
| 11 | A | A | -0.0328 | |
| 12 | P | A | -0.0958 | |
| 13 | C | A | 0.0000 | |
| 14 | I | A | 0.6124 | |
| 15 | T | A | -0.0451 | |
| 16 | F | A | 0.0000 | |
| 17 | L | A | 0.0000 | |
| 18 | T | A | -1.3982 | |
| 19 | K | A | -1.7727 | |
| 20 | G | A | -0.8558 | |
| 21 | G | A | -0.0958 | |
| 22 | V | A | 0.8919 | |
| 23 | P | A | 0.0000 | |
| 24 | S | A | -0.0041 | |
| 25 | G | A | -0.5081 | |
| 26 | P | A | -0.7686 | |
| 27 | C | A | 0.0000 | |
| 28 | C | A | 0.0000 | |
| 29 | S | A | -1.0894 | |
| 30 | G | A | -1.1550 | |
| 31 | V | A | 0.0000 | |
| 32 | R | A | -1.9549 | |
| 33 | G | A | -1.2384 | |
| 34 | L | A | -0.8571 | |
| 35 | L | A | -0.6416 | |
| 36 | G | A | -1.0954 | |
| 37 | A | A | -0.9264 | |
| 38 | A | A | 0.0000 | |
| 39 | K | A | -1.3806 | |
| 40 | T | A | -0.7445 | |
| 41 | T | A | -0.5328 | |
| 42 | A | A | -0.4665 | |
| 43 | D | A | -0.7945 | |
| 44 | R | A | -0.8564 | |
| 45 | Q | A | -0.9939 | |
| 46 | A | A | -0.5346 | |
| 47 | A | A | 0.0000 | |
| 48 | C | A | 0.0000 | |
| 49 | N | A | -1.6288 | |
| 50 | C | A | 0.0000 | |
| 51 | L | A | -0.5679 | |
| 52 | K | A | -1.2068 | |
| 53 | A | A | -0.7006 | |
| 54 | A | A | -0.5796 | |
| 55 | A | A | -0.8438 | |
| 56 | G | A | -0.7314 | |
| 57 | S | A | -0.6109 | |
| 58 | L | A | -0.4238 | |
| 59 | H | A | -1.2466 | |
| 60 | G | A | -1.3289 | |
| 61 | L | A | -1.3085 | |
| 62 | N | A | -2.0723 | |
| 63 | Q | A | -1.8340 | |
| 64 | G | A | -1.3186 | |
| 65 | N | A | -1.3401 | |
| 66 | A | A | -0.8447 | |
| 67 | A | A | -1.1236 | |
| 68 | A | A | -1.0973 | |
| 69 | L | A | 0.0000 | |
| 70 | P | A | 0.0000 | |
| 71 | G | A | -1.4338 | |
| 72 | R | A | -1.8746 | |
| 73 | C | A | 0.0000 | |
| 74 | G | A | -1.3742 | |
| 75 | V | A | -0.7980 | |
| 76 | S | A | -0.4912 | |
| 77 | I | A | -0.0208 | |
| 78 | P | A | -0.2784 | |
| 79 | Y | A | -0.8062 | |
| 80 | K | A | -1.3890 | |
| 81 | I | A | -0.6817 | |
| 82 | S | A | -0.9742 | |
| 83 | T | A | -1.0599 | |
| 84 | S | A | -0.8252 | |
| 85 | T | A | -1.2367 | |
| 86 | N | A | -1.5880 | |
| 87 | C | A | 0.0000 | |
| 88 | A | A | -0.9098 | |
| 89 | T | A | -0.8534 | |
| 90 | I | A | 0.0000 | |
| 91 | K | A | -0.9220 | |
| 92 | F | A | 0.5947 |