| Chain sequence(s) |
C: QIVMTQSPFSMYATLGERVTITCKASQDIYSYLSWLQQKPGKSSLKTLIYRANRLITGVPSRFSGSGSGQDYSLTISSLEEYEDMGIYYCLQYDEFPYTFGGGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINNVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:30)
[INFO] Main: Simulation completed successfully. (00:04:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | C | -0.5936 | |
| 2 | I | C | 0.3560 | |
| 3 | V | C | 1.5103 | |
| 4 | M | C | 0.0000 | |
| 5 | T | C | 0.1361 | |
| 6 | Q | C | -0.1480 | |
| 7 | S | C | 0.1498 | |
| 8 | P | C | 0.6843 | |
| 9 | F | C | 1.6815 | |
| 10 | S | C | 0.9587 | |
| 11 | M | C | 0.7107 | |
| 12 | Y | C | 0.5012 | |
| 13 | A | C | 0.0000 | |
| 14 | T | C | -0.8840 | |
| 15 | L | C | -0.6648 | |
| 16 | G | C | -1.2994 | |
| 17 | E | C | -2.0721 | |
| 18 | R | C | -2.4544 | |
| 19 | V | C | 0.0000 | |
| 20 | T | C | -0.5437 | |
| 21 | I | C | 0.0000 | |
| 22 | T | C | -0.5382 | |
| 23 | C | C | 0.0000 | |
| 24 | K | C | -1.9581 | |
| 25 | A | C | 0.0000 | |
| 26 | S | C | -0.9753 | |
| 27 | Q | C | -1.8845 | |
| 28 | D | C | -1.8346 | |
| 29 | I | C | 0.0000 | |
| 30 | Y | C | 0.4000 | |
| 31 | S | C | -0.2135 | |
| 32 | Y | C | 0.1407 | |
| 33 | L | C | 0.0000 | |
| 34 | S | C | 0.0000 | |
| 35 | W | C | 0.0000 | |
| 36 | L | C | 0.0000 | |
| 37 | Q | C | 0.0000 | |
| 38 | Q | C | -0.9455 | |
| 39 | K | C | -1.7578 | |
| 40 | P | C | -1.7334 | |
| 41 | G | C | -1.6081 | |
| 42 | K | C | -2.2129 | |
| 43 | S | C | -1.1000 | |
| 44 | L | C | -0.1191 | |
| 45 | K | C | -1.0442 | |
| 46 | T | C | -0.0910 | |
| 47 | L | C | 0.0000 | |
| 48 | I | C | 0.0000 | |
| 49 | Y | C | -0.3218 | |
| 50 | R | C | -1.0286 | |
| 51 | A | C | 0.0000 | |
| 52 | N | C | -2.2380 | |
| 53 | R | C | -2.2277 | |
| 54 | L | C | -0.8724 | |
| 55 | I | C | -0.0449 | |
| 56 | T | C | -0.2613 | |
| 57 | G | C | -0.3891 | |
| 58 | V | C | 0.0000 | |
| 59 | P | C | -0.3630 | |
| 60 | S | C | -0.4361 | |
| 61 | R | C | -0.9006 | |
| 62 | F | C | 0.0000 | |
| 63 | S | C | -0.9267 | |
| 64 | G | C | -1.2201 | |
| 65 | S | C | -1.4959 | |
| 66 | G | C | -1.3734 | |
| 67 | S | C | -1.2254 | |
| 68 | G | C | -1.3802 | |
| 69 | Q | C | -2.5168 | |
| 70 | D | C | -2.8276 | |
| 71 | Y | C | 0.0000 | |
| 72 | S | C | -0.9652 | |
| 73 | L | C | 0.0000 | |
| 74 | T | C | -0.6443 | |
| 75 | I | C | 0.0000 | |
| 76 | S | C | -1.5342 | |
| 77 | S | C | -1.4577 | |
| 78 | L | C | 0.0000 | |
| 79 | E | C | -1.6068 | |
| 80 | Y | C | -1.7777 | |
| 81 | E | C | -2.5500 | |
| 82 | D | C | 0.0000 | |
| 83 | M | C | 0.0000 | |
| 84 | G | C | 0.0000 | |
| 85 | I | C | 0.3507 | |
| 86 | Y | C | 0.0000 | |
| 87 | Y | C | 0.4274 | |
| 88 | C | C | 0.0000 | |
| 89 | L | C | 1.1983 | |
| 90 | Q | C | 0.0000 | |
| 91 | Y | C | 0.7110 | |
| 92 | D | C | -0.5849 | |
| 93 | E | C | -0.9243 | |
| 94 | F | C | 1.1892 | |
| 95 | P | C | 1.0901 | |
| 96 | Y | C | 1.7888 | |
| 97 | T | C | 1.5472 | |
| 98 | F | C | 2.0059 | |
| 99 | G | C | 0.0000 | |
| 100 | G | C | 0.3594 | |
| 101 | G | C | 0.3820 | |
| 102 | T | C | 0.0000 | |
| 103 | K | C | 0.2155 | |
| 104 | L | C | 0.0000 | |
| 105 | E | C | -0.4020 | |
| 106 | M | C | 0.0000 | |
| 107 | K | C | -1.4595 | |
| 108 | R | C | -1.5123 | |
| 109 | A | C | -1.3972 | |
| 110 | D | C | -2.4215 | |
| 111 | A | C | -1.3544 | |
| 112 | A | C | -0.8132 | |
| 113 | P | C | 0.0000 | |
| 114 | T | C | -0.1646 | |
| 115 | V | C | 0.2197 | |
| 116 | S | C | 0.5116 | |
| 117 | I | C | 0.9130 | |
| 118 | F | C | 1.2219 | |
| 119 | P | C | 0.0235 | |
| 120 | P | C | -0.4910 | |
| 121 | S | C | -0.8175 | |
| 122 | S | C | -1.2814 | |
| 123 | E | C | -2.1607 | |
| 124 | Q | C | -1.4860 | |
| 125 | L | C | -1.2040 | |
| 126 | T | C | -1.0061 | |
| 127 | S | C | -0.9312 | |
| 128 | G | C | -1.1894 | |
| 129 | G | C | -1.2236 | |
| 130 | A | C | 0.0000 | |
| 131 | S | C | 0.0072 | |
| 132 | V | C | 0.0000 | |
| 133 | V | C | 1.0136 | |
| 134 | C | C | 0.0000 | |
| 135 | F | C | 0.8046 | |
| 136 | L | C | 0.0000 | |
| 137 | N | C | -0.5516 | |
| 138 | N | C | -1.2549 | |
| 139 | F | C | 0.0000 | |
| 140 | Y | C | 0.0000 | |
| 141 | P | C | -2.1029 | |
| 142 | K | C | -2.4187 | |
| 143 | D | C | -2.6832 | |
| 144 | I | C | -1.6495 | |
| 145 | N | C | -1.9624 | |
| 146 | V | C | -0.7857 | |
| 147 | K | C | -1.8362 | |
| 148 | W | C | 0.0000 | |
| 149 | K | C | -2.3740 | |
| 150 | I | C | 0.0000 | |
| 151 | D | C | -2.6788 | |
| 152 | G | C | -1.9821 | |
| 153 | S | C | -2.1402 | |
| 154 | E | C | -3.3424 | |
| 155 | R | C | -2.9979 | |
| 156 | Q | C | -2.6008 | |
| 157 | N | C | -1.9560 | |
| 158 | G | C | -0.6070 | |
| 159 | V | C | -0.0201 | |
| 160 | L | C | 1.0086 | |
| 161 | N | C | 0.2589 | |
| 162 | S | C | 0.2538 | |
| 163 | W | C | 0.1880 | |
| 164 | T | C | -0.6811 | |
| 165 | D | C | -1.5379 | |
| 166 | Q | C | 0.0000 | |
| 167 | D | C | -2.2968 | |
| 168 | S | C | -2.3708 | |
| 169 | K | C | -2.5198 | |
| 170 | D | C | -1.6934 | |
| 171 | S | C | 0.0000 | |
| 172 | T | C | 0.0000 | |
| 173 | Y | C | 0.0000 | |
| 174 | S | C | -0.6149 | |
| 175 | M | C | 0.0000 | |
| 176 | S | C | 0.4519 | |
| 177 | S | C | 0.0000 | |
| 178 | T | C | 0.7506 | |
| 179 | L | C | 0.0000 | |
| 180 | T | C | -0.1155 | |
| 181 | L | C | 0.0000 | |
| 182 | T | C | -1.6541 | |
| 183 | K | C | -2.6858 | |
| 184 | D | C | -3.7010 | |
| 185 | E | C | -3.3915 | |
| 186 | Y | C | 0.0000 | |
| 187 | E | C | -4.3209 | |
| 188 | R | C | -4.2138 | |
| 189 | H | C | -3.7509 | |
| 190 | N | C | -3.5766 | |
| 191 | S | C | -2.3549 | |
| 192 | Y | C | 0.0000 | |
| 193 | T | C | -1.1299 | |
| 194 | C | C | 0.0000 | |
| 195 | E | C | -0.5039 | |
| 196 | A | C | 0.0000 | |
| 197 | T | C | -1.1015 | |
| 198 | H | C | 0.0000 | |
| 199 | K | C | -2.5416 | |
| 200 | T | C | -1.3560 | |
| 201 | S | C | -0.7313 | |
| 202 | T | C | -0.6107 | |
| 203 | S | C | -0.3923 | |
| 204 | P | C | -0.4287 | |
| 205 | I | C | 0.4961 | |
| 206 | V | C | 0.5287 | |
| 207 | K | C | -0.0765 | |
| 208 | S | C | -0.5350 | |
| 209 | F | C | -0.9787 | |
| 210 | N | C | -2.6255 | |
| 211 | R | C | -3.1337 |