| Chain sequence(s) |
A: GCIAKNKECAWFSGEWCCGALSCKYSIKRNLKICV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2311 | |
| 2 | C | A | -0.0017 | |
| 3 | I | A | 0.0000 | |
| 4 | A | A | -1.3044 | |
| 5 | K | A | -2.3098 | |
| 6 | N | A | -3.0688 | |
| 7 | K | A | -3.1393 | |
| 8 | E | A | -2.8168 | |
| 9 | C | A | 0.0000 | |
| 10 | A | A | 0.4476 | |
| 11 | W | A | 1.7103 | |
| 12 | F | A | 2.1062 | |
| 13 | S | A | 0.3801 | |
| 14 | G | A | -0.2951 | |
| 15 | E | A | -0.9358 | |
| 16 | W | A | 0.6877 | |
| 17 | C | A | 0.0000 | |
| 18 | C | A | 0.1394 | |
| 19 | G | A | -0.0907 | |
| 20 | A | A | 0.3405 | |
| 21 | L | A | 0.3430 | |
| 22 | S | A | 0.2264 | |
| 23 | C | A | -0.3859 | |
| 24 | K | A | -0.3291 | |
| 25 | Y | A | 0.6027 | |
| 26 | S | A | 0.0000 | |
| 27 | I | A | 0.7023 | |
| 28 | K | A | -1.2714 | |
| 29 | R | A | -1.5265 | |
| 30 | N | A | -0.8844 | |
| 31 | L | A | -0.4164 | |
| 32 | K | A | -0.8516 | |
| 33 | I | A | 0.0000 | |
| 34 | C | A | 0.0000 | |
| 35 | V | A | 0.0512 |