Project name: query_structure

Status: done

Started: 2026-03-16 23:18:21
Settings
Chain sequence(s) A: GCIAKNKECAWFSGEWCCGALSCKYSIKRNLKICV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:01)
Show buried residues

Minimal score value
-3.1393
Maximal score value
2.1062
Average score
-0.3463
Total score value
-12.1214

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2311
2 C A -0.0017
3 I A 0.0000
4 A A -1.3044
5 K A -2.3098
6 N A -3.0688
7 K A -3.1393
8 E A -2.8168
9 C A 0.0000
10 A A 0.4476
11 W A 1.7103
12 F A 2.1062
13 S A 0.3801
14 G A -0.2951
15 E A -0.9358
16 W A 0.6877
17 C A 0.0000
18 C A 0.1394
19 G A -0.0907
20 A A 0.3405
21 L A 0.3430
22 S A 0.2264
23 C A -0.3859
24 K A -0.3291
25 Y A 0.6027
26 S A 0.0000
27 I A 0.7023
28 K A -1.2714
29 R A -1.5265
30 N A -0.8844
31 L A -0.4164
32 K A -0.8516
33 I A 0.0000
34 C A 0.0000
35 V A 0.0512
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Laboratory of Theory of Biopolymers 2018