| Chain sequence(s) |
A: MDAMKRGLCCVLLLCGAVFVSPSQEIHARSACGSLSPASQTPPPSPPPPLVPPVVLGSPKPEEIPAAWIPSGTTILNCFDERALVFTSRPVSVAETIFIKVTRSEFQSEKSKISKFHFLVANSQSKMKSPRGRRGGDVYTVAGSSGLSQVPSRCAARGMSLWDQRGAYEVARASLLSKDRRKCTQHNRLREFFCPEHGECICHIRNLVFSIDLGPFSFPFYLQRIIRLSYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:04)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:04)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:04)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:04)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:04)
[INFO] Main: Simulation completed successfully. (00:03:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1686 | |
| 2 | D | A | -1.8671 | |
| 3 | A | A | -1.0865 | |
| 4 | M | A | -0.4660 | |
| 5 | K | A | -2.0235 | |
| 6 | R | A | -2.0799 | |
| 7 | G | A | -0.3686 | |
| 8 | L | A | 1.3476 | |
| 9 | C | A | 2.0119 | |
| 10 | C | A | 2.6570 | |
| 11 | V | A | 3.6733 | |
| 12 | L | A | 4.1226 | |
| 13 | L | A | 4.2411 | |
| 14 | L | A | 4.0317 | |
| 15 | C | A | 3.4337 | |
| 16 | G | A | 2.7333 | |
| 17 | A | A | 2.8953 | |
| 18 | V | A | 3.7082 | |
| 19 | F | A | 3.5702 | |
| 20 | V | A | 2.9445 | |
| 21 | S | A | 1.1241 | |
| 22 | P | A | -0.3353 | |
| 23 | S | A | -0.9776 | |
| 24 | Q | A | -1.8732 | |
| 25 | E | A | -1.7716 | |
| 26 | I | A | 0.1309 | |
| 27 | H | A | -1.0985 | |
| 28 | A | A | -1.0575 | |
| 29 | R | A | -1.8707 | |
| 30 | S | A | -1.0240 | |
| 31 | A | A | -0.2290 | |
| 32 | C | A | 0.2545 | |
| 33 | G | A | 0.1287 | |
| 34 | S | A | 0.4336 | |
| 35 | L | A | 1.1810 | |
| 36 | S | A | 0.3351 | |
| 37 | P | A | -0.1614 | |
| 38 | A | A | -0.5337 | |
| 39 | S | A | -0.8904 | |
| 40 | Q | A | -1.4471 | |
| 41 | T | A | -0.9161 | |
| 42 | P | A | -0.8464 | |
| 43 | P | A | -0.7446 | |
| 44 | P | A | -0.6423 | |
| 45 | S | A | -0.6530 | |
| 46 | P | A | -0.6633 | |
| 47 | P | A | -0.4404 | |
| 48 | P | A | 0.0300 | |
| 49 | P | A | 0.7297 | |
| 50 | L | A | 2.0861 | |
| 51 | V | A | 2.4908 | |
| 52 | P | A | 1.5024 | |
| 53 | P | A | 1.7654 | |
| 54 | V | A | 3.0775 | |
| 55 | V | A | 3.1342 | |
| 56 | L | A | 2.5405 | |
| 57 | G | A | 0.6343 | |
| 58 | S | A | -0.3595 | |
| 59 | P | A | -1.5623 | |
| 60 | K | A | -2.7695 | |
| 61 | P | A | -2.2194 | |
| 62 | E | A | -3.0403 | |
| 63 | E | A | -2.8037 | |
| 64 | I | A | -0.4409 | |
| 65 | P | A | 0.1086 | |
| 66 | A | A | 0.4298 | |
| 67 | A | A | 0.9290 | |
| 68 | W | A | 1.6824 | |
| 69 | I | A | 1.4250 | |
| 70 | P | A | 0.1639 | |
| 71 | S | A | -0.2394 | |
| 72 | G | A | -0.6354 | |
| 73 | T | A | 0.2837 | |
| 74 | T | A | 1.0610 | |
| 75 | I | A | 2.7229 | |
| 76 | L | A | 2.7846 | |
| 77 | N | A | 0.8154 | |
| 78 | C | A | 0.7804 | |
| 79 | F | A | 0.5419 | |
| 80 | D | A | -2.1259 | |
| 81 | E | A | -2.8150 | |
| 82 | R | A | -2.4077 | |
| 83 | A | A | -0.0127 | |
| 84 | L | A | 2.5334 | |
| 85 | V | A | 3.6017 | |
| 86 | F | A | 3.3683 | |
| 87 | T | A | 1.1850 | |
| 88 | S | A | -0.4226 | |
| 89 | R | A | -1.5106 | |
| 90 | P | A | -0.2679 | |
| 91 | V | A | 1.5426 | |
| 92 | S | A | 1.0279 | |
| 93 | V | A | 1.7425 | |
| 94 | A | A | 0.4349 | |
| 95 | E | A | -0.8843 | |
| 96 | T | A | 0.9124 | |
| 97 | I | A | 2.7498 | |
| 98 | F | A | 3.9733 | |
| 99 | I | A | 3.7450 | |
| 100 | K | A | 1.1797 | |
| 101 | V | A | 1.6979 | |
| 102 | T | A | -0.7553 | |
| 103 | R | A | -2.0488 | |
| 104 | S | A | -1.4144 | |
| 105 | E | A | -1.8065 | |
| 106 | F | A | -0.1536 | |
| 107 | Q | A | -1.5252 | |
| 108 | S | A | -1.8076 | |
| 109 | E | A | -3.0238 | |
| 110 | K | A | -3.0054 | |
| 111 | S | A | -1.9541 | |
| 112 | K | A | -1.5883 | |
| 113 | I | A | 0.6901 | |
| 114 | S | A | -0.1685 | |
| 115 | K | A | -0.5882 | |
| 116 | F | A | 1.5306 | |
| 117 | H | A | 1.0447 | |
| 118 | F | A | 3.0305 | |
| 119 | L | A | 3.1731 | |
| 120 | V | A | 2.5846 | |
| 121 | A | A | 0.7716 | |
| 122 | N | A | -0.9750 | |
| 123 | S | A | -1.4118 | |
| 124 | Q | A | -2.0021 | |
| 125 | S | A | -1.7912 | |
| 126 | K | A | -2.0392 | |
| 127 | M | A | -0.8760 | |
| 128 | K | A | -1.8078 | |
| 129 | S | A | -1.5652 | |
| 130 | P | A | -1.6118 | |
| 131 | R | A | -2.6225 | |
| 132 | G | A | -2.7975 | |
| 133 | R | A | -3.4325 | |
| 134 | R | A | -3.1692 | |
| 135 | G | A | -2.2301 | |
| 136 | G | A | -1.6496 | |
| 137 | D | A | -0.9708 | |
| 138 | V | A | 1.5608 | |
| 139 | Y | A | 2.1714 | |
| 140 | T | A | 1.6769 | |
| 141 | V | A | 2.1568 | |
| 142 | A | A | 0.7482 | |
| 143 | G | A | -0.2922 | |
| 144 | S | A | -0.4842 | |
| 145 | S | A | -0.2992 | |
| 146 | G | A | -0.0884 | |
| 147 | L | A | 1.0589 | |
| 148 | S | A | 0.2493 | |
| 149 | Q | A | -0.1926 | |
| 150 | V | A | 0.9232 | |
| 151 | P | A | -0.1722 | |
| 152 | S | A | -0.7327 | |
| 153 | R | A | -1.4097 | |
| 154 | C | A | -0.4932 | |
| 155 | A | A | -0.5543 | |
| 156 | A | A | -0.8247 | |
| 157 | R | A | -1.7077 | |
| 158 | G | A | -0.7069 | |
| 159 | M | A | 0.2105 | |
| 160 | S | A | 0.3806 | |
| 161 | L | A | 0.9409 | |
| 162 | W | A | 0.2010 | |
| 163 | D | A | -1.6545 | |
| 164 | Q | A | -1.9761 | |
| 165 | R | A | -2.2437 | |
| 166 | G | A | -1.6254 | |
| 167 | A | A | -0.8920 | |
| 168 | Y | A | -0.6317 | |
| 169 | E | A | -1.2718 | |
| 170 | V | A | 0.8005 | |
| 171 | A | A | 0.6201 | |
| 172 | R | A | -0.3107 | |
| 173 | A | A | 0.3780 | |
| 174 | S | A | 0.4496 | |
| 175 | L | A | 1.0348 | |
| 176 | L | A | 0.6894 | |
| 177 | S | A | -0.9495 | |
| 178 | K | A | -2.2727 | |
| 179 | D | A | -2.9367 | |
| 180 | R | A | -3.9522 | |
| 181 | R | A | -4.2284 | |
| 182 | K | A | -3.5523 | |
| 183 | C | A | -2.0471 | |
| 184 | T | A | -1.6403 | |
| 185 | Q | A | -2.3195 | |
| 186 | H | A | -1.8896 | |
| 187 | N | A | -3.3005 | |
| 188 | R | A | -3.3078 | |
| 189 | L | A | -1.6210 | |
| 190 | R | A | -2.6809 | |
| 191 | E | A | -1.7047 | |
| 192 | F | A | 1.0380 | |
| 193 | F | A | 0.5663 | |
| 194 | C | A | -0.4413 | |
| 195 | P | A | -1.2057 | |
| 196 | E | A | -2.5416 | |
| 197 | H | A | -2.3713 | |
| 198 | G | A | -1.6836 | |
| 199 | E | A | -1.0601 | |
| 200 | C | A | 0.0000 | |
| 201 | I | A | 2.2327 | |
| 202 | C | A | 1.0681 | |
| 203 | H | A | -0.5937 | |
| 204 | I | A | 0.4865 | |
| 205 | R | A | -1.2641 | |
| 206 | N | A | -0.5903 | |
| 207 | L | A | 2.0796 | |
| 208 | V | A | 3.5961 | |
| 209 | F | A | 3.5339 | |
| 210 | S | A | 2.4394 | |
| 211 | I | A | 1.6516 | |
| 212 | D | A | -0.6056 | |
| 213 | L | A | 1.4207 | |
| 214 | G | A | 0.3302 | |
| 215 | P | A | 0.8100 | |
| 216 | F | A | 2.3915 | |
| 217 | S | A | 2.1176 | |
| 218 | F | A | 3.4091 | |
| 219 | P | A | 2.0505 | |
| 220 | F | A | 2.5591 | |
| 221 | Y | A | 2.3156 | |
| 222 | L | A | 1.3065 | |
| 223 | Q | A | -0.3987 | |
| 224 | R | A | -0.7795 | |
| 225 | I | A | 1.2102 | |
| 226 | I | A | 1.4150 | |
| 227 | R | A | -0.5298 | |
| 228 | L | A | 1.1337 | |
| 229 | S | A | 1.2605 | |
| 230 | Y | A | 1.6442 | |
| 231 | P | A | 0.7903 | |
| 232 | Y | A | 1.1337 | |
| 233 | D | A | -0.4447 | |
| 234 | V | A | 0.8380 | |
| 235 | P | A | -0.2215 | |
| 236 | D | A | -1.0429 | |
| 237 | Y | A | 0.6436 | |
| 238 | A | A | 0.1688 |