Project name: 58db5749fd05571

Status: done

Started: 2026-06-15 10:10:46
Settings
Chain sequence(s) H: EVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARAPLRFLEWSTQDHYYYYYMDVWGKGTTVTVSS
L: SSELTQDPAVSVALGQTVRITCQGDSLRSYYATWYQQKPGQAPILVIYGENKRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCKSRDGSGQHLVFGGGTKLTVL
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:03)
Show buried residues

Minimal score value
-3.1196
Maximal score value
2.782
Average score
-0.482
Total score value
-114.7047

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0588
2 V H -1.1489
3 Q H -1.0825
4 L H 0.0000
5 V H 0.7258
6 Q H -0.1342
7 S H -0.5938
8 G H -0.4438
9 A H -0.0241
10 E H -0.0034
11 V H 1.0892
12 K H -0.6781
13 K H -1.8726
14 P H -2.2202
15 G H -1.6215
16 S H -1.2606
17 S H -1.4181
18 V H 0.0000
19 K H -1.9971
20 V H 0.0000
21 S H -0.4937
22 C H 0.0000
23 K H -0.6362
24 A H -0.4641
25 S H -0.7881
26 G H -1.2783
27 G H -0.9812
28 T H -0.4851
29 F H 0.0000
30 S H 0.3672
31 S H 0.8477
32 Y H 0.6490
33 A H 0.8550
34 I H 0.0000
35 S H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H -0.5859
40 A H -0.9874
41 P H -0.8087
42 G H -1.2378
43 Q H -1.7215
44 G H -1.1539
45 L H 0.0000
46 E H -0.7631
47 W H 0.0000
48 M H 0.0000
49 G H 0.0000
50 G H -0.0800
51 I H 0.0000
52 I H 1.4887
53 P H 0.0000
54 I H 2.4602
55 F H 2.7820
56 G H 0.9813
57 T H 0.6834
58 A H 0.0208
59 N H -0.9505
60 Y H -1.2353
61 A H -1.6406
62 Q H -2.5485
63 K H -2.7237
64 F H 0.0000
65 Q H -2.4662
66 G H -1.6296
67 R H -1.4355
68 V H 0.0000
69 T H -0.8272
70 I H 0.0000
71 T H -0.3411
72 A H -0.3308
73 D H -1.3173
74 K H -1.7551
75 S H -1.2258
76 T H -0.9687
77 S H -1.2529
78 T H 0.0000
79 A H 0.0000
80 Y H -0.4899
81 M H 0.0000
82 E H -1.4048
83 L H 0.0000
84 S H -1.2145
85 S H -1.2569
86 L H 0.0000
87 R H -3.1196
88 S H -2.3670
89 E H -2.6140
90 D H 0.0000
91 T H -0.8555
92 A H 0.0000
93 V H 0.1334
94 Y H 0.0000
95 Y H 0.0000
96 C H 0.0000
97 A H 0.0000
98 R H -0.1497
99 A H 0.0000
100 P H 0.8743
101 L H 1.9743
102 R H 1.7574
103 F H 2.4386
104 L H 1.8895
105 E H -0.3873
106 W H -0.0449
107 S H -0.8648
108 T H -1.7304
109 Q H -2.5094
110 D H -2.7311
111 H H -1.3236
112 Y H 1.1585
113 Y H 1.2554
114 Y H 1.3545
115 Y H 0.7755
116 Y H 0.0000
117 M H 0.0000
118 D H -0.2611
119 V H -0.4191
120 W H 0.0000
121 G H 0.0000
122 K H -1.5550
123 G H -0.8152
124 T H 0.0000
125 T H 0.0056
126 V H 0.0000
127 T H -0.2274
128 V H 0.0000
129 S H -0.9900
130 S H -0.7301
1 S L -1.1722
2 S L -1.5346
3 E L -2.2490
4 L L 0.0000
5 T L -1.0564
6 Q L 0.0000
7 D L -0.7344
8 P L -0.7498
9 A L -0.5074
10 V L -0.3288
11 S L 0.1705
12 V L 0.0000
13 A L 0.8434
14 L L 1.2721
15 G L -0.3373
16 Q L -0.9322
17 T L -0.8654
18 V L 0.0000
19 R L -1.0218
20 I L 0.0000
21 T L -0.5262
22 C L 0.0000
23 Q L -1.6071
24 G L -1.9008
25 D L -2.4105
26 S L 0.0000
27 L L -1.4976
28 R L -2.4369
29 S L -1.2753
30 Y L -0.0181
31 Y L 0.5470
32 A L 0.0000
33 T L 0.0000
34 W L 0.0000
35 Y L 0.0000
36 Q L 0.0000
37 Q L 0.0000
38 K L -1.1177
39 P L -1.0822
40 G L -1.0422
41 Q L -1.4473
42 A L -0.8003
43 P L 0.0000
44 I L 1.0059
45 L L 0.0000
46 V L 0.0000
47 I L 0.0000
48 Y L -0.5392
49 G L -0.2301
50 E L -0.8087
51 N L -1.4673
52 K L -2.2361
53 R L -1.9745
54 P L -1.0967
55 S L -0.8968
56 G L -0.8090
57 I L -0.5247
58 P L -1.1175
59 D L -2.1506
60 R L 0.0000
61 F L 0.0000
62 S L -1.2303
63 G L -0.9518
64 S L -0.6741
65 S L -0.6982
66 S L -0.8728
67 G L -1.5059
68 N L -1.6862
69 T L -1.0450
70 A L 0.0000
71 S L 0.0000
72 L L 0.0000
73 T L -0.6026
74 I L 0.0000
75 T L -1.0328
76 G L -0.7128
77 A L 0.0000
78 Q L -0.7776
79 A L -0.4783
80 E L -1.6672
81 D L 0.0000
82 E L -1.2723
83 A L 0.0000
84 D L -1.1178
85 Y L 0.0000
86 Y L 0.0000
87 C L 0.0000
88 K L 0.0000
89 S L 0.0000
90 R L -0.4437
91 D L 0.0000
92 G L -1.4366
93 S L -0.8128
94 G L -0.6825
95 Q L -1.3155
96 H L -0.9894
97 L L -0.3589
98 V L -0.5445
99 F L -0.3249
100 G L 0.0000
101 G L -1.0372
102 G L 0.0000
103 T L 0.0000
104 K L -1.2453
105 L L 0.0000
106 T L 0.1851
107 V L 0.6589
108 L L 1.7976
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Laboratory of Theory of Biopolymers 2018