| Chain sequence(s) |
H: EVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARAPLRFLEWSTQDHYYYYYMDVWGKGTTVTVSS
L: SSELTQDPAVSVALGQTVRITCQGDSLRSYYATWYQQKPGQAPILVIYGENKRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCKSRDGSGQHLVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0588 | |
| 2 | V | H | -1.1489 | |
| 3 | Q | H | -1.0825 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7258 | |
| 6 | Q | H | -0.1342 | |
| 7 | S | H | -0.5938 | |
| 8 | G | H | -0.4438 | |
| 9 | A | H | -0.0241 | |
| 10 | E | H | -0.0034 | |
| 11 | V | H | 1.0892 | |
| 12 | K | H | -0.6781 | |
| 13 | K | H | -1.8726 | |
| 14 | P | H | -2.2202 | |
| 15 | G | H | -1.6215 | |
| 16 | S | H | -1.2606 | |
| 17 | S | H | -1.4181 | |
| 18 | V | H | 0.0000 | |
| 19 | K | H | -1.9971 | |
| 20 | V | H | 0.0000 | |
| 21 | S | H | -0.4937 | |
| 22 | C | H | 0.0000 | |
| 23 | K | H | -0.6362 | |
| 24 | A | H | -0.4641 | |
| 25 | S | H | -0.7881 | |
| 26 | G | H | -1.2783 | |
| 27 | G | H | -0.9812 | |
| 28 | T | H | -0.4851 | |
| 29 | F | H | 0.0000 | |
| 30 | S | H | 0.3672 | |
| 31 | S | H | 0.8477 | |
| 32 | Y | H | 0.6490 | |
| 33 | A | H | 0.8550 | |
| 34 | I | H | 0.0000 | |
| 35 | S | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.5859 | |
| 40 | A | H | -0.9874 | |
| 41 | P | H | -0.8087 | |
| 42 | G | H | -1.2378 | |
| 43 | Q | H | -1.7215 | |
| 44 | G | H | -1.1539 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.7631 | |
| 47 | W | H | 0.0000 | |
| 48 | M | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | G | H | -0.0800 | |
| 51 | I | H | 0.0000 | |
| 52 | I | H | 1.4887 | |
| 53 | P | H | 0.0000 | |
| 54 | I | H | 2.4602 | |
| 55 | F | H | 2.7820 | |
| 56 | G | H | 0.9813 | |
| 57 | T | H | 0.6834 | |
| 58 | A | H | 0.0208 | |
| 59 | N | H | -0.9505 | |
| 60 | Y | H | -1.2353 | |
| 61 | A | H | -1.6406 | |
| 62 | Q | H | -2.5485 | |
| 63 | K | H | -2.7237 | |
| 64 | F | H | 0.0000 | |
| 65 | Q | H | -2.4662 | |
| 66 | G | H | -1.6296 | |
| 67 | R | H | -1.4355 | |
| 68 | V | H | 0.0000 | |
| 69 | T | H | -0.8272 | |
| 70 | I | H | 0.0000 | |
| 71 | T | H | -0.3411 | |
| 72 | A | H | -0.3308 | |
| 73 | D | H | -1.3173 | |
| 74 | K | H | -1.7551 | |
| 75 | S | H | -1.2258 | |
| 76 | T | H | -0.9687 | |
| 77 | S | H | -1.2529 | |
| 78 | T | H | 0.0000 | |
| 79 | A | H | 0.0000 | |
| 80 | Y | H | -0.4899 | |
| 81 | M | H | 0.0000 | |
| 82 | E | H | -1.4048 | |
| 83 | L | H | 0.0000 | |
| 84 | S | H | -1.2145 | |
| 85 | S | H | -1.2569 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -3.1196 | |
| 88 | S | H | -2.3670 | |
| 89 | E | H | -2.6140 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.8555 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | 0.1334 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | -0.1497 | |
| 99 | A | H | 0.0000 | |
| 100 | P | H | 0.8743 | |
| 101 | L | H | 1.9743 | |
| 102 | R | H | 1.7574 | |
| 103 | F | H | 2.4386 | |
| 104 | L | H | 1.8895 | |
| 105 | E | H | -0.3873 | |
| 106 | W | H | -0.0449 | |
| 107 | S | H | -0.8648 | |
| 108 | T | H | -1.7304 | |
| 109 | Q | H | -2.5094 | |
| 110 | D | H | -2.7311 | |
| 111 | H | H | -1.3236 | |
| 112 | Y | H | 1.1585 | |
| 113 | Y | H | 1.2554 | |
| 114 | Y | H | 1.3545 | |
| 115 | Y | H | 0.7755 | |
| 116 | Y | H | 0.0000 | |
| 117 | M | H | 0.0000 | |
| 118 | D | H | -0.2611 | |
| 119 | V | H | -0.4191 | |
| 120 | W | H | 0.0000 | |
| 121 | G | H | 0.0000 | |
| 122 | K | H | -1.5550 | |
| 123 | G | H | -0.8152 | |
| 124 | T | H | 0.0000 | |
| 125 | T | H | 0.0056 | |
| 126 | V | H | 0.0000 | |
| 127 | T | H | -0.2274 | |
| 128 | V | H | 0.0000 | |
| 129 | S | H | -0.9900 | |
| 130 | S | H | -0.7301 | |
| 1 | S | L | -1.1722 | |
| 2 | S | L | -1.5346 | |
| 3 | E | L | -2.2490 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -1.0564 | |
| 6 | Q | L | 0.0000 | |
| 7 | D | L | -0.7344 | |
| 8 | P | L | -0.7498 | |
| 9 | A | L | -0.5074 | |
| 10 | V | L | -0.3288 | |
| 11 | S | L | 0.1705 | |
| 12 | V | L | 0.0000 | |
| 13 | A | L | 0.8434 | |
| 14 | L | L | 1.2721 | |
| 15 | G | L | -0.3373 | |
| 16 | Q | L | -0.9322 | |
| 17 | T | L | -0.8654 | |
| 18 | V | L | 0.0000 | |
| 19 | R | L | -1.0218 | |
| 20 | I | L | 0.0000 | |
| 21 | T | L | -0.5262 | |
| 22 | C | L | 0.0000 | |
| 23 | Q | L | -1.6071 | |
| 24 | G | L | -1.9008 | |
| 25 | D | L | -2.4105 | |
| 26 | S | L | 0.0000 | |
| 27 | L | L | -1.4976 | |
| 28 | R | L | -2.4369 | |
| 29 | S | L | -1.2753 | |
| 30 | Y | L | -0.0181 | |
| 31 | Y | L | 0.5470 | |
| 32 | A | L | 0.0000 | |
| 33 | T | L | 0.0000 | |
| 34 | W | L | 0.0000 | |
| 35 | Y | L | 0.0000 | |
| 36 | Q | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | K | L | -1.1177 | |
| 39 | P | L | -1.0822 | |
| 40 | G | L | -1.0422 | |
| 41 | Q | L | -1.4473 | |
| 42 | A | L | -0.8003 | |
| 43 | P | L | 0.0000 | |
| 44 | I | L | 1.0059 | |
| 45 | L | L | 0.0000 | |
| 46 | V | L | 0.0000 | |
| 47 | I | L | 0.0000 | |
| 48 | Y | L | -0.5392 | |
| 49 | G | L | -0.2301 | |
| 50 | E | L | -0.8087 | |
| 51 | N | L | -1.4673 | |
| 52 | K | L | -2.2361 | |
| 53 | R | L | -1.9745 | |
| 54 | P | L | -1.0967 | |
| 55 | S | L | -0.8968 | |
| 56 | G | L | -0.8090 | |
| 57 | I | L | -0.5247 | |
| 58 | P | L | -1.1175 | |
| 59 | D | L | -2.1506 | |
| 60 | R | L | 0.0000 | |
| 61 | F | L | 0.0000 | |
| 62 | S | L | -1.2303 | |
| 63 | G | L | -0.9518 | |
| 64 | S | L | -0.6741 | |
| 65 | S | L | -0.6982 | |
| 66 | S | L | -0.8728 | |
| 67 | G | L | -1.5059 | |
| 68 | N | L | -1.6862 | |
| 69 | T | L | -1.0450 | |
| 70 | A | L | 0.0000 | |
| 71 | S | L | 0.0000 | |
| 72 | L | L | 0.0000 | |
| 73 | T | L | -0.6026 | |
| 74 | I | L | 0.0000 | |
| 75 | T | L | -1.0328 | |
| 76 | G | L | -0.7128 | |
| 77 | A | L | 0.0000 | |
| 78 | Q | L | -0.7776 | |
| 79 | A | L | -0.4783 | |
| 80 | E | L | -1.6672 | |
| 81 | D | L | 0.0000 | |
| 82 | E | L | -1.2723 | |
| 83 | A | L | 0.0000 | |
| 84 | D | L | -1.1178 | |
| 85 | Y | L | 0.0000 | |
| 86 | Y | L | 0.0000 | |
| 87 | C | L | 0.0000 | |
| 88 | K | L | 0.0000 | |
| 89 | S | L | 0.0000 | |
| 90 | R | L | -0.4437 | |
| 91 | D | L | 0.0000 | |
| 92 | G | L | -1.4366 | |
| 93 | S | L | -0.8128 | |
| 94 | G | L | -0.6825 | |
| 95 | Q | L | -1.3155 | |
| 96 | H | L | -0.9894 | |
| 97 | L | L | -0.3589 | |
| 98 | V | L | -0.5445 | |
| 99 | F | L | -0.3249 | |
| 100 | G | L | 0.0000 | |
| 101 | G | L | -1.0372 | |
| 102 | G | L | 0.0000 | |
| 103 | T | L | 0.0000 | |
| 104 | K | L | -1.2453 | |
| 105 | L | L | 0.0000 | |
| 106 | T | L | 0.1851 | |
| 107 | V | L | 0.6589 | |
| 108 | L | L | 1.7976 |