Project name: query_structure

Status: done

Started: 2026-03-16 21:44:41
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSPPLAARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:49)
Show buried residues

Minimal score value
-3.0839
Maximal score value
1.2346
Average score
-0.7683
Total score value
-69.1463

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0644
2 L A 0.4281
3 P A -0.2056
4 A A -0.4686
5 P A 0.0000
6 K A -2.0091
7 N A -1.3352
8 L A -0.1927
9 V A 0.7792
10 V A 0.0400
11 S A -0.6106
12 R A -2.0132
13 V A -1.0389
14 T A -1.8041
15 E A -3.0751
16 D A -2.8024
17 S A -2.1104
18 A A 0.0000
19 R A -1.2038
20 L A 0.0000
21 S A -0.3622
22 W A 0.0000
23 T A -1.2903
24 A A -1.4133
25 P A -1.4088
26 D A -2.2805
27 A A -1.4425
28 A A -1.1986
29 F A 0.0000
30 D A -2.4798
31 S A 0.0000
32 F A 0.0000
33 N A -0.5433
34 I A 0.0000
35 A A 0.0000
36 Y A 0.3070
37 W A -0.2694
38 E A -1.0147
39 P A -0.7832
40 G A 0.0909
41 I A 1.2346
42 G A -0.1572
43 G A -0.4874
44 E A -1.3284
45 A A -0.1595
46 I A 0.9429
47 W A 1.0741
48 L A 0.0830
49 R A -1.5789
50 V A 0.0000
51 P A -1.5515
52 G A 0.0000
53 S A -1.6368
54 E A -1.5777
55 R A -1.1981
56 S A -0.6670
57 Y A -0.7430
58 D A -1.6688
59 L A 0.0000
60 T A -1.3685
61 G A -1.5192
62 L A 0.0000
63 K A -3.0839
64 P A -2.6550
65 G A -1.9531
66 T A -2.0643
67 E A -2.5969
68 Y A 0.0000
69 K A -1.2752
70 V A 0.0000
71 W A 0.5405
72 I A 0.0000
73 H A 0.0000
74 G A 0.0000
75 V A -1.2655
76 K A -1.8057
77 G A -1.4610
78 G A -1.1652
79 A A -0.6245
80 S A -0.3129
81 S A 0.0000
82 P A 0.0872
83 P A -0.1012
84 L A -0.0068
85 A A -0.1493
86 A A -0.5124
87 R A -1.9948
88 F A 0.0000
89 T A -1.7884
90 T A -2.0038
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Laboratory of Theory of Biopolymers 2018