| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPSSRYEHYQFVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTWTGDVPWYWLVNPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35)
[INFO] Main: Simulation completed successfully. (00:01:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.3776 | |
| 2 | S | A | 0.0248 | |
| 3 | D | A | -0.4755 | |
| 4 | V | A | -0.4145 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.8775 | |
| 7 | D | A | -3.2394 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.0913 | |
| 10 | V | A | 0.0678 | |
| 11 | V | A | 1.5268 | |
| 12 | A | A | 0.8944 | |
| 13 | A | A | 0.3029 | |
| 14 | T | A | -0.3372 | |
| 15 | P | A | -1.1163 | |
| 16 | T | A | -0.9908 | |
| 17 | S | A | -0.5244 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7434 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1232 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.1428 | |
| 24 | A | A | -1.5284 | |
| 25 | P | A | 0.0000 | |
| 26 | S | A | -0.8594 | |
| 27 | S | A | -0.5496 | |
| 28 | R | A | -1.7632 | |
| 29 | Y | A | -0.4006 | |
| 30 | E | A | -1.9455 | |
| 31 | H | A | -0.9714 | |
| 32 | Y | A | 0.8738 | |
| 33 | Q | A | 0.6850 | |
| 34 | F | A | 1.6757 | |
| 35 | V | A | 0.4059 | |
| 36 | R | A | -0.9225 | |
| 37 | Y | A | -0.3959 | |
| 38 | Y | A | 0.0000 | |
| 39 | R | A | -0.6884 | |
| 40 | I | A | 0.0000 | |
| 41 | T | A | -0.5372 | |
| 42 | Y | A | -0.2950 | |
| 43 | G | A | 0.0000 | |
| 44 | E | A | -1.5727 | |
| 45 | T | A | -1.2506 | |
| 46 | G | A | -1.2452 | |
| 47 | G | A | -1.3828 | |
| 48 | N | A | -1.5641 | |
| 49 | S | A | -0.8753 | |
| 50 | P | A | -0.3251 | |
| 51 | V | A | 0.4462 | |
| 52 | Q | A | -0.8250 | |
| 53 | E | A | -1.6324 | |
| 54 | F | A | -0.6546 | |
| 55 | T | A | -0.2644 | |
| 56 | V | A | 0.0000 | |
| 57 | P | A | -1.0291 | |
| 58 | G | A | -0.8508 | |
| 59 | S | A | -1.0667 | |
| 60 | K | A | -2.1117 | |
| 61 | S | A | -1.3868 | |
| 62 | T | A | -0.7701 | |
| 63 | A | A | 0.0000 | |
| 64 | T | A | 0.2358 | |
| 65 | I | A | 0.0000 | |
| 66 | S | A | -0.6545 | |
| 67 | G | A | -1.0278 | |
| 68 | L | A | 0.0000 | |
| 69 | K | A | -2.3724 | |
| 70 | P | A | -1.6597 | |
| 71 | G | A | -1.4409 | |
| 72 | V | A | -1.4430 | |
| 73 | D | A | -2.0711 | |
| 74 | Y | A | 0.0000 | |
| 75 | T | A | -0.7703 | |
| 76 | I | A | 0.0000 | |
| 77 | T | A | -0.2315 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | 0.3551 | |
| 80 | A | A | 0.0000 | |
| 81 | V | A | 0.8932 | |
| 82 | T | A | 0.0000 | |
| 83 | W | A | 1.5212 | |
| 84 | T | A | 1.0121 | |
| 85 | G | A | -0.1689 | |
| 86 | D | A | -1.1493 | |
| 87 | V | A | 0.6137 | |
| 88 | P | A | 0.8097 | |
| 89 | W | A | 2.2740 | |
| 90 | Y | A | 2.9795 | |
| 91 | W | A | 2.9090 | |
| 92 | L | A | 2.1146 | |
| 93 | V | A | 1.2998 | |
| 94 | N | A | 0.3115 | |
| 95 | P | A | -0.0490 | |
| 96 | I | A | -0.1337 | |
| 97 | S | A | -0.5621 | |
| 98 | I | A | -0.7288 | |
| 99 | N | A | -1.7162 | |
| 100 | Y | A | -1.4452 | |
| 101 | R | A | -2.5043 | |
| 102 | T | A | -1.4933 |