| Chain sequence(s) |
A: AKKEELLKKAEEAEDKAYKLMAEALTLASKESNEAAGKVARAYAAALNKGKEAGKEYAKEAAKLAKRGEELLKLANEALDALEESKKLRKEAKEL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:51)
[INFO] Main: Simulation completed successfully. (00:03:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -2.0405 | |
| 2 | K | A | -3.3063 | |
| 3 | K | A | -3.9336 | |
| 4 | E | A | -3.7090 | |
| 5 | E | A | -4.1997 | |
| 6 | L | A | -4.2136 | |
| 7 | L | A | -4.2061 | |
| 8 | K | A | -4.6683 | |
| 9 | K | A | -4.1742 | |
| 10 | A | A | 0.0000 | |
| 11 | E | A | -4.9750 | |
| 12 | E | A | -4.7950 | |
| 13 | A | A | -4.1262 | |
| 14 | E | A | -4.2543 | |
| 15 | D | A | -4.3301 | |
| 16 | K | A | -4.1649 | |
| 17 | A | A | 0.0000 | |
| 18 | Y | A | -1.6108 | |
| 19 | K | A | -2.6696 | |
| 20 | L | A | -2.1307 | |
| 21 | M | A | 0.0000 | |
| 22 | A | A | -1.0786 | |
| 23 | E | A | -1.8315 | |
| 24 | A | A | 0.0000 | |
| 25 | L | A | -0.7742 | |
| 26 | T | A | -0.8930 | |
| 27 | L | A | -1.3798 | |
| 28 | A | A | 0.0000 | |
| 29 | S | A | -1.8608 | |
| 30 | K | A | -2.2422 | |
| 31 | E | A | -2.1898 | |
| 32 | S | A | -2.0381 | |
| 33 | N | A | -2.5905 | |
| 34 | E | A | -2.6714 | |
| 35 | A | A | 0.0000 | |
| 36 | A | A | -1.6715 | |
| 37 | G | A | -1.8573 | |
| 38 | K | A | -2.1910 | |
| 39 | V | A | 0.0000 | |
| 40 | A | A | -1.1470 | |
| 41 | R | A | -2.0682 | |
| 42 | A | A | 0.0000 | |
| 43 | Y | A | 0.0000 | |
| 44 | A | A | -0.9108 | |
| 45 | A | A | 0.0000 | |
| 46 | A | A | 0.0000 | |
| 47 | L | A | -0.5345 | |
| 48 | N | A | -1.7311 | |
| 49 | K | A | -2.5039 | |
| 50 | G | A | -2.0775 | |
| 51 | K | A | -2.5791 | |
| 52 | E | A | -3.0637 | |
| 53 | A | A | -2.3902 | |
| 54 | G | A | 0.0000 | |
| 55 | K | A | -2.7307 | |
| 56 | E | A | -3.2262 | |
| 57 | Y | A | -2.3824 | |
| 58 | A | A | 0.0000 | |
| 59 | K | A | -2.9120 | |
| 60 | E | A | -2.4994 | |
| 61 | A | A | 0.0000 | |
| 62 | A | A | -2.5323 | |
| 63 | K | A | -2.5518 | |
| 64 | L | A | -1.6446 | |
| 65 | A | A | -2.5801 | |
| 66 | K | A | -3.1212 | |
| 67 | R | A | -3.1528 | |
| 68 | G | A | 0.0000 | |
| 69 | E | A | -3.6435 | |
| 70 | E | A | -2.9582 | |
| 71 | L | A | 0.0000 | |
| 72 | L | A | -2.5512 | |
| 73 | K | A | -2.8685 | |
| 74 | L | A | -2.1915 | |
| 75 | A | A | 0.0000 | |
| 76 | N | A | -2.4204 | |
| 77 | E | A | -2.6836 | |
| 78 | A | A | 0.0000 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -3.2729 | |
| 81 | A | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | E | A | -2.4959 | |
| 84 | E | A | -3.3329 | |
| 85 | S | A | 0.0000 | |
| 86 | K | A | -3.2604 | |
| 87 | K | A | -3.7053 | |
| 88 | L | A | -4.3396 | |
| 89 | R | A | -5.0622 | |
| 90 | K | A | -4.7903 | |
| 91 | E | A | -4.5455 | |
| 92 | A | A | 0.0000 | |
| 93 | K | A | -3.7723 | |
| 94 | E | A | -3.2856 | |
| 95 | L | A | -1.4245 |