Project name: LC1_5

Status: done

Started: 2026-07-29 02:46:18
Settings
Chain sequence(s) A: AKKEELLKKAEEAEDKAYKLMAEALTLASKESNEAAGKVARAYAAALNKGKEAGKEYAKEAAKLAKRGEELLKLANEALDALEESKKLRKEAKEL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:51)
Show buried residues

Minimal score value
-5.0622
Maximal score value
0.0
Average score
-2.1444
Total score value
-203.7214

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -2.0405
2 K A -3.3063
3 K A -3.9336
4 E A -3.7090
5 E A -4.1997
6 L A -4.2136
7 L A -4.2061
8 K A -4.6683
9 K A -4.1742
10 A A 0.0000
11 E A -4.9750
12 E A -4.7950
13 A A -4.1262
14 E A -4.2543
15 D A -4.3301
16 K A -4.1649
17 A A 0.0000
18 Y A -1.6108
19 K A -2.6696
20 L A -2.1307
21 M A 0.0000
22 A A -1.0786
23 E A -1.8315
24 A A 0.0000
25 L A -0.7742
26 T A -0.8930
27 L A -1.3798
28 A A 0.0000
29 S A -1.8608
30 K A -2.2422
31 E A -2.1898
32 S A -2.0381
33 N A -2.5905
34 E A -2.6714
35 A A 0.0000
36 A A -1.6715
37 G A -1.8573
38 K A -2.1910
39 V A 0.0000
40 A A -1.1470
41 R A -2.0682
42 A A 0.0000
43 Y A 0.0000
44 A A -0.9108
45 A A 0.0000
46 A A 0.0000
47 L A -0.5345
48 N A -1.7311
49 K A -2.5039
50 G A -2.0775
51 K A -2.5791
52 E A -3.0637
53 A A -2.3902
54 G A 0.0000
55 K A -2.7307
56 E A -3.2262
57 Y A -2.3824
58 A A 0.0000
59 K A -2.9120
60 E A -2.4994
61 A A 0.0000
62 A A -2.5323
63 K A -2.5518
64 L A -1.6446
65 A A -2.5801
66 K A -3.1212
67 R A -3.1528
68 G A 0.0000
69 E A -3.6435
70 E A -2.9582
71 L A 0.0000
72 L A -2.5512
73 K A -2.8685
74 L A -2.1915
75 A A 0.0000
76 N A -2.4204
77 E A -2.6836
78 A A 0.0000
79 L A 0.0000
80 D A -3.2729
81 A A 0.0000
82 L A 0.0000
83 E A -2.4959
84 E A -3.3329
85 S A 0.0000
86 K A -3.2604
87 K A -3.7053
88 L A -4.3396
89 R A -5.0622
90 K A -4.7903
91 E A -4.5455
92 A A 0.0000
93 K A -3.7723
94 E A -3.2856
95 L A -1.4245
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Laboratory of Theory of Biopolymers 2018