| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTLDYYAINWFRQAPGKEREGVSCISGGDGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCATALGLSSSCHGDGYDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.7385 | |
| 2 | V | A | -0.0944 | |
| 3 | Q | A | -0.7900 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.3827 | |
| 6 | E | A | 0.0361 | |
| 7 | S | A | -0.2947 | |
| 8 | G | A | -0.3936 | |
| 9 | G | A | -0.2855 | |
| 10 | G | A | 0.0578 | |
| 11 | L | A | 1.5449 | |
| 12 | V | A | 0.2500 | |
| 13 | Q | A | -1.1975 | |
| 14 | P | A | -0.4872 | |
| 15 | G | A | -0.5354 | |
| 16 | G | A | -0.2265 | |
| 17 | S | A | -0.2499 | |
| 18 | L | A | -0.1145 | |
| 19 | R | A | -1.8414 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.0292 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | 0.0225 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.2972 | |
| 26 | G | A | -0.4049 | |
| 27 | F | A | 0.1358 | |
| 28 | T | A | -0.0019 | |
| 29 | L | A | 0.0000 | |
| 30 | D | A | -0.3821 | |
| 31 | Y | A | 1.2600 | |
| 32 | Y | A | 0.5368 | |
| 33 | A | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | N | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.1930 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.3911 | |
| 40 | A | A | -0.0876 | |
| 41 | P | A | -0.3370 | |
| 42 | G | A | -0.8139 | |
| 43 | K | A | -2.1200 | |
| 44 | E | A | -2.2692 | |
| 45 | R | A | -1.3531 | |
| 46 | E | A | -1.5210 | |
| 47 | G | A | -0.3736 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | C | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | G | A | 0.0000 | |
| 54 | G | A | -0.7882 | |
| 55 | D | A | -1.9058 | |
| 56 | G | A | -0.5367 | |
| 57 | S | A | -0.2313 | |
| 58 | T | A | 0.0568 | |
| 59 | Y | A | 0.7957 | |
| 60 | Y | A | 0.3379 | |
| 61 | A | A | -0.2771 | |
| 62 | D | A | -1.8259 | |
| 63 | S | A | -0.5324 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -1.7849 | |
| 66 | G | A | -0.8285 | |
| 67 | R | A | -0.3801 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.0516 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.1565 | |
| 72 | R | A | -0.4168 | |
| 73 | D | A | -0.7660 | |
| 74 | N | A | -1.0130 | |
| 75 | S | A | -0.6702 | |
| 76 | K | A | -1.7767 | |
| 77 | N | A | -0.6216 | |
| 78 | T | A | 0.0000 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | 0.1391 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -0.5717 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -0.7143 | |
| 85 | S | A | -0.2946 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -1.1799 | |
| 88 | A | A | -0.4819 | |
| 89 | E | A | -1.8095 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.0158 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.7381 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.1288 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | T | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | L | A | 0.2371 | |
| 101 | G | A | -0.1249 | |
| 102 | L | A | 1.4511 | |
| 103 | S | A | 0.1825 | |
| 104 | S | A | -0.1702 | |
| 105 | S | A | -0.1288 | |
| 106 | C | A | -0.0945 | |
| 107 | H | A | -0.9926 | |
| 108 | G | A | -0.6235 | |
| 109 | D | A | -1.8593 | |
| 110 | G | A | -0.5219 | |
| 111 | Y | A | 0.0064 | |
| 112 | D | A | -1.6502 | |
| 113 | Y | A | 0.1256 | |
| 114 | W | A | 0.4435 | |
| 115 | G | A | -0.1968 | |
| 116 | Q | A | -1.2245 | |
| 117 | G | A | -0.2919 | |
| 118 | T | A | 0.2559 | |
| 119 | L | A | 1.6204 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | 0.1517 | |
| 122 | V | A | 0.0000 | |
| 123 | S | A | -0.1387 | |
| 124 | S | A | -0.2310 |