Project name: M-3

Status: done

Started: 2026-07-13 12:35:43
Settings
Chain sequence(s) A: EVQLVESGGGLVQPGGSLRLSCAASGFTLDYYAINWFRQAPGKEREGVSCISGGDGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCATALGLSSSCHGDGYDYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:53)
Show buried residues

Minimal score value
-2.2692
Maximal score value
1.6204
Average score
-0.2776
Total score value
-34.4205

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.7385
2 V A -0.0944
3 Q A -0.7900
4 L A 0.0000
5 V A 1.3827
6 E A 0.0361
7 S A -0.2947
8 G A -0.3936
9 G A -0.2855
10 G A 0.0578
11 L A 1.5449
12 V A 0.2500
13 Q A -1.1975
14 P A -0.4872
15 G A -0.5354
16 G A -0.2265
17 S A -0.2499
18 L A -0.1145
19 R A -1.8414
20 L A 0.0000
21 S A -0.0292
22 C A 0.0000
23 A A 0.0225
24 A A 0.0000
25 S A -0.2972
26 G A -0.4049
27 F A 0.1358
28 T A -0.0019
29 L A 0.0000
30 D A -0.3821
31 Y A 1.2600
32 Y A 0.5368
33 A A 0.0000
34 I A 0.0000
35 N A 0.0000
36 W A 0.0000
37 F A 0.1930
38 R A 0.0000
39 Q A -0.3911
40 A A -0.0876
41 P A -0.3370
42 G A -0.8139
43 K A -2.1200
44 E A -2.2692
45 R A -1.3531
46 E A -1.5210
47 G A -0.3736
48 V A 0.0000
49 S A 0.0000
50 C A 0.0000
51 I A 0.0000
52 S A 0.0000
53 G A 0.0000
54 G A -0.7882
55 D A -1.9058
56 G A -0.5367
57 S A -0.2313
58 T A 0.0568
59 Y A 0.7957
60 Y A 0.3379
61 A A -0.2771
62 D A -1.8259
63 S A -0.5324
64 V A 0.0000
65 K A -1.7849
66 G A -0.8285
67 R A -0.3801
68 F A 0.0000
69 T A -0.0516
70 I A 0.0000
71 S A -0.1565
72 R A -0.4168
73 D A -0.7660
74 N A -1.0130
75 S A -0.6702
76 K A -1.7767
77 N A -0.6216
78 T A 0.0000
79 L A 0.0000
80 Y A 0.1391
81 L A 0.0000
82 Q A -0.5717
83 M A 0.0000
84 N A -0.7143
85 S A -0.2946
86 L A 0.0000
87 R A -1.1799
88 A A -0.4819
89 E A -1.8095
90 D A 0.0000
91 T A -0.0158
92 A A 0.0000
93 V A 0.7381
94 Y A 0.0000
95 Y A 0.1288
96 C A 0.0000
97 A A 0.0000
98 T A 0.0000
99 A A 0.0000
100 L A 0.2371
101 G A -0.1249
102 L A 1.4511
103 S A 0.1825
104 S A -0.1702
105 S A -0.1288
106 C A -0.0945
107 H A -0.9926
108 G A -0.6235
109 D A -1.8593
110 G A -0.5219
111 Y A 0.0064
112 D A -1.6502
113 Y A 0.1256
114 W A 0.4435
115 G A -0.1968
116 Q A -1.2245
117 G A -0.2919
118 T A 0.2559
119 L A 1.6204
120 V A 0.0000
121 T A 0.1517
122 V A 0.0000
123 S A -0.1387
124 S A -0.2310
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Laboratory of Theory of Biopolymers 2018