Project name: 592391504a8bc66

Status: done

Started: 2026-02-11 11:15:09
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Chain sequence(s) A: GGKGHFG
C: GGKGHFG
B: GGKGHFG
E: GGKGHFG
D: GGKGHFG
G: GGKGHFG
F: GGKGHFG
I: GGKGHFG
H: GGKGHFG
K: GGKGHFG
J: GGKGHFG
M: GGKGHFG
L: GGKGHFG
O: GGKGHFG
N: GGKGHFG
Q: GGKGHFG
P: GGKGHFG
S: GGKGHFG
R: GGKGHFG
T: GGKGHFG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:03)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:03)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:03)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:03)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:59)
Show buried residues

Minimal score value
-3.5008
Maximal score value
0.7786
Average score
-1.3015
Total score value
-182.2141

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.6254
2 G A 0.0000
3 K A -1.9828
4 G A 0.0000
5 H A -1.3897
6 F A 0.0000
7 G A -1.5133
1 G B -1.8722
2 G B 0.0000
3 K B -3.0766
4 G B 0.0000
5 H B -1.6517
6 F B 0.0000
7 G B -1.6677
1 G C -1.5466
2 G C -2.3623
3 K C -2.7031
4 G C 0.0000
5 H C -1.5756
6 F C 0.0000
7 G C -1.8138
1 G D -1.1434
2 G D -1.7885
3 K D -2.8393
4 G D -1.8570
5 H D -1.1435
6 F D 0.7786
7 G D -0.5986
1 G E -2.3797
2 G E -3.0123
3 K E -3.2819
4 G E -2.2366
5 H E -1.9341
6 F E -1.2146
7 G E -1.1266
1 G F -2.2791
2 G F 0.0000
3 K F -3.5008
4 G F 0.0000
5 H F -2.1764
6 F F 0.0000
7 G F -1.5442
1 G G -1.8789
2 G G -2.3063
3 K G -2.8859
4 G G 0.0000
5 H G -1.9702
6 F G 0.0000
7 G G -1.4309
1 G H -1.7764
2 G H 0.0000
3 K H -2.8674
4 G H 0.0000
5 H H -1.7392
6 F H 0.0000
7 G H -1.3882
1 G I -1.8017
2 G I 0.0000
3 K I -2.9241
4 G I 0.0000
5 H I -1.9685
6 F I 0.0000
7 G I -1.5412
1 G J -1.5722
2 G J -1.8538
3 K J -2.4270
4 G J 0.0000
5 H J -2.0358
6 F J 0.0000
7 G J -1.7777
1 G K -1.2843
2 G K -1.8212
3 K K -2.6721
4 G K 0.0000
5 H K -1.7534
6 F K 0.0000
7 G K -1.8660
1 G L -1.6544
2 G L -1.9289
3 K L -2.3931
4 G L 0.0000
5 H L -2.0234
6 F L 0.0000
7 G L -1.8102
1 G M -1.2700
2 G M -1.5246
3 K M -2.4403
4 G M -2.0283
5 H M -2.0010
6 F M -1.7824
7 G M -1.2993
1 G N -1.4614
2 G N -1.8317
3 K N -2.8388
4 G N -1.3571
5 H N -0.9490
6 F N 0.6382
7 G N -0.1469
1 G O -1.7196
2 G O -2.1635
3 K O -2.7491
4 G O 0.0000
5 H O -1.5614
6 F O 0.0000
7 G O -0.8796
1 G P -1.9815
2 G P 0.0000
3 K P -2.6954
4 G P 0.0000
5 H P -1.8051
6 F P 0.0000
7 G P -1.1979
1 G Q -2.1673
2 G Q -2.3232
3 K Q -2.5055
4 G Q 0.0000
5 H Q -1.5016
6 F Q 0.0000
7 G Q -1.3841
1 G R -2.0714
2 G R -2.3489
3 K R -2.2975
4 G R 0.0000
5 H R -1.4675
6 F R 0.0000
7 G R -1.4000
1 G S -1.6648
2 G S 0.0000
3 K S -1.9390
4 G S 0.0000
5 H S -1.3668
6 F S 0.0000
7 G S -1.4504
1 G T -1.0077
2 G T -1.3164
3 K T -1.3636
4 G T 0.0000
5 H T 0.0000
6 F T -0.7742
7 G T -1.4073
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Laboratory of Theory of Biopolymers 2018