Project name: query_structure

Status: done

Started: 2026-03-16 23:43:29
Settings
Chain sequence(s) A: GTCNTPGCSCSWPVCTRNGLPICGETCVG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:06)
Show buried residues

Minimal score value
-1.2776
Maximal score value
1.8831
Average score
0.1452
Total score value
4.2104

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.3568
2 T A 0.2556
3 C A -0.1886
4 N A -1.1117
5 T A -1.0374
6 P A -0.8921
7 G A -1.0907
8 C A -0.6267
9 S A -0.4703
10 C A 0.4303
11 S A 0.5565
12 W A 1.3999
13 P A 0.9265
14 V A 1.3513
15 C A 0.0000
16 T A 0.0000
17 R A -0.6715
18 N A -1.2776
19 G A -0.3702
20 L A 1.2199
21 P A 1.0397
22 I A 1.8831
23 C A 0.4826
24 G A 0.2148
25 E A -0.0495
26 T A 0.3484
27 C A 0.0000
28 V A 1.2614
29 G A 0.2699
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Laboratory of Theory of Biopolymers 2018