| Chain sequence(s) |
A: GTCNTPGCSCSWPVCTRNGLPICGETCVG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.3568 | |
| 2 | T | A | 0.2556 | |
| 3 | C | A | -0.1886 | |
| 4 | N | A | -1.1117 | |
| 5 | T | A | -1.0374 | |
| 6 | P | A | -0.8921 | |
| 7 | G | A | -1.0907 | |
| 8 | C | A | -0.6267 | |
| 9 | S | A | -0.4703 | |
| 10 | C | A | 0.4303 | |
| 11 | S | A | 0.5565 | |
| 12 | W | A | 1.3999 | |
| 13 | P | A | 0.9265 | |
| 14 | V | A | 1.3513 | |
| 15 | C | A | 0.0000 | |
| 16 | T | A | 0.0000 | |
| 17 | R | A | -0.6715 | |
| 18 | N | A | -1.2776 | |
| 19 | G | A | -0.3702 | |
| 20 | L | A | 1.2199 | |
| 21 | P | A | 1.0397 | |
| 22 | I | A | 1.8831 | |
| 23 | C | A | 0.4826 | |
| 24 | G | A | 0.2148 | |
| 25 | E | A | -0.0495 | |
| 26 | T | A | 0.3484 | |
| 27 | C | A | 0.0000 | |
| 28 | V | A | 1.2614 | |
| 29 | G | A | 0.2699 |