Project name: query_structure

Status: done

Started: 2026-03-16 22:48:39
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGPFWHYQTFTVPGSKSTATISGLKPGVDYTITVYTYSSSMHFSSSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:34)
Show buried residues

Minimal score value
-2.705
Maximal score value
1.8949
Average score
-0.3212
Total score value
-29.8757

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6587
2 S A 0.6063
3 S A 0.2799
4 V A 0.0528
5 P A 0.0000
6 T A -1.5708
7 K A -2.6149
8 L A 0.0000
9 E A -1.9539
10 V A 0.0765
11 V A 1.5132
12 A A 0.8703
13 A A 0.2829
14 T A -0.5543
15 P A -1.1455
16 T A -1.0035
17 S A -0.5492
18 L A 0.0000
19 L A 0.6959
20 I A 0.0000
21 S A -0.9805
22 W A 0.0000
23 D A -2.7050
24 A A -1.4060
25 S A -0.3653
26 S A -0.2766
27 S A -0.0922
28 S A -0.2832
29 V A -0.1483
30 S A 0.0444
31 Y A 0.0646
32 Y A 0.0000
33 R A -0.1652
34 I A 0.0000
35 T A 0.0000
36 Y A -0.3251
37 G A 0.0000
38 E A -1.3082
39 T A -0.8455
40 G A -0.5244
41 G A -0.1787
42 P A 0.7033
43 F A 1.8949
44 W A 1.4408
45 H A -0.1440
46 Y A 0.0540
47 Q A -0.8252
48 T A -0.5526
49 F A 0.0623
50 T A 0.0981
51 V A 0.0000
52 P A -0.6518
53 G A -0.6150
54 S A -1.0543
55 K A -2.0151
56 S A -1.4062
57 T A -0.7862
58 A A 0.0000
59 T A 0.2210
60 I A 0.0000
61 S A -0.6666
62 G A -1.0303
63 L A 0.0000
64 K A -2.3317
65 P A -1.6293
66 G A -1.4001
67 V A -1.2934
68 D A -1.9835
69 Y A 0.0000
70 T A -0.8823
71 I A 0.0000
72 T A -0.1149
73 V A 0.0000
74 Y A 0.1052
75 T A 0.0000
76 Y A 0.5638
77 S A 0.4359
78 S A 0.0735
79 S A 0.2615
80 M A 1.1335
81 H A 0.3478
82 F A 1.7477
83 S A 0.7480
84 S A 0.5046
85 S A 0.0727
86 P A -0.0395
87 I A 0.0810
88 S A -0.3564
89 I A -0.7193
90 N A -1.7023
91 Y A -1.4074
92 R A -2.4790
93 T A -1.4881
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Laboratory of Theory of Biopolymers 2018