| Chain sequence(s) |
A: NFVVIK
C: NFVVIK B: NFVVIK E: NFVVIK D: NFVVIK G: NFVVIK F: NFVVIK I: NFVVIK H: NFVVIK J: NFVVIK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | E | -1.3950 | |
| 2 | F | E | 0.0000 | |
| 3 | V | E | 1.1550 | |
| 4 | V | E | 0.0000 | |
| 5 | I | E | 1.1642 | |
| 6 | K | E | -0.8850 | |
| 1 | N | C | -1.4822 | |
| 2 | F | C | 0.0000 | |
| 3 | V | C | 1.2396 | |
| 4 | V | C | 0.0000 | |
| 5 | I | C | 1.5068 | |
| 6 | K | C | 0.0293 | |
| 1 | N | A | -0.6936 | |
| 2 | F | A | 1.1578 | |
| 3 | V | A | 2.2170 | |
| 4 | V | A | 2.2085 | |
| 5 | I | A | 1.7583 | |
| 6 | K | A | -0.9307 | |
| 1 | N | B | -1.0104 | |
| 2 | F | B | 0.8519 | |
| 3 | V | B | 1.1608 | |
| 4 | V | B | 1.0380 | |
| 5 | I | B | 0.5289 | |
| 6 | K | B | -1.5146 | |
| 1 | N | D | -1.9612 | |
| 2 | F | D | -0.9197 | |
| 3 | V | D | 0.0000 | |
| 4 | V | D | 0.0000 | |
| 5 | I | D | -0.0621 | |
| 6 | K | D | -1.6397 | |
| 1 | N | I | -0.8023 | |
| 2 | F | I | 0.8682 | |
| 3 | V | I | 2.6450 | |
| 4 | V | I | 2.1880 | |
| 5 | I | I | 1.8570 | |
| 6 | K | I | -0.9563 | |
| 1 | N | G | -1.4345 | |
| 2 | F | G | 0.0000 | |
| 3 | V | G | 1.4527 | |
| 4 | V | G | 0.0000 | |
| 5 | I | G | 1.8288 | |
| 6 | K | G | 0.0092 | |
| 1 | N | F | -2.2130 | |
| 2 | F | F | -0.8652 | |
| 3 | V | F | 0.0000 | |
| 4 | V | F | 0.0000 | |
| 5 | I | F | 0.0000 | |
| 6 | K | F | -2.3138 | |
| 1 | N | H | -2.1069 | |
| 2 | F | H | -1.0868 | |
| 3 | V | H | 0.0000 | |
| 4 | V | H | 0.0000 | |
| 5 | I | H | 0.0000 | |
| 6 | K | H | -1.1434 | |
| 1 | N | J | -0.8059 | |
| 2 | F | J | 1.1831 | |
| 3 | V | J | 1.1490 | |
| 4 | V | J | 1.2429 | |
| 5 | I | J | 0.1805 | |
| 6 | K | J | -1.6414 |