| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.7205 | |
| 2 | A | A | -2.4196 | |
| 3 | E | A | -2.5661 | |
| 4 | F | A | -0.9892 | |
| 5 | R | A | -2.7498 | |
| 6 | H | A | -3.0605 | |
| 7 | D | A | -2.6325 | |
| 8 | S | A | -1.3739 | |
| 9 | G | A | -0.6290 | |
| 10 | Y | A | -0.2682 | |
| 11 | E | A | -1.1154 | |
| 12 | V | A | 0.4409 | |
| 13 | H | A | -1.1634 | |
| 14 | H | A | -1.1638 | |
| 15 | Q | A | -0.4199 | |
| 16 | K | A | -0.9584 | |
| 17 | L | A | 0.6238 | |
| 18 | V | A | 0.4213 | |
| 19 | F | A | 1.7515 | |
| 20 | F | A | 1.8238 | |
| 21 | A | A | 0.3837 | |
| 22 | E | A | -1.0286 | |
| 23 | D | A | -1.5678 | |
| 24 | V | A | -0.8877 | |
| 25 | G | A | -1.6018 | |
| 26 | S | A | -1.6980 | |
| 27 | N | A | -2.3388 | |
| 28 | K | A | -2.1212 | |
| 29 | G | A | -0.4553 | |
| 30 | A | A | 0.1211 | |
| 31 | I | A | 2.2515 | |
| 32 | I | A | 3.1413 | |
| 33 | G | A | 2.2908 | |
| 34 | L | A | 3.0350 | |
| 35 | M | A | 3.4122 | |
| 36 | V | A | 2.9308 | |
| 37 | G | A | 1.9830 | |
| 38 | G | A | 1.8550 | |
| 39 | V | A | 3.0365 | |
| 40 | V | A | 3.8560 | |
| 41 | I | A | 3.4881 | |
| 42 | A | A | 1.8371 |