Project name: A?42

Status: done

Started: 2026-06-01 13:43:07
Settings
Chain sequence(s) A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:00)
Show buried residues

Minimal score value
-3.0605
Maximal score value
3.856
Average score
0.0656
Total score value
2.754

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.7205
2 A A -2.4196
3 E A -2.5661
4 F A -0.9892
5 R A -2.7498
6 H A -3.0605
7 D A -2.6325
8 S A -1.3739
9 G A -0.6290
10 Y A -0.2682
11 E A -1.1154
12 V A 0.4409
13 H A -1.1634
14 H A -1.1638
15 Q A -0.4199
16 K A -0.9584
17 L A 0.6238
18 V A 0.4213
19 F A 1.7515
20 F A 1.8238
21 A A 0.3837
22 E A -1.0286
23 D A -1.5678
24 V A -0.8877
25 G A -1.6018
26 S A -1.6980
27 N A -2.3388
28 K A -2.1212
29 G A -0.4553
30 A A 0.1211
31 I A 2.2515
32 I A 3.1413
33 G A 2.2908
34 L A 3.0350
35 M A 3.4122
36 V A 2.9308
37 G A 1.9830
38 G A 1.8550
39 V A 3.0365
40 V A 3.8560
41 I A 3.4881
42 A A 1.8371
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Laboratory of Theory of Biopolymers 2018