Project name: 597ec3bcc078c0d

Status: done

Started: 2026-07-21 13:55:59
Settings
Chain sequence(s) A: HHLLASDEEIQDVSGTWYLKAMTVDREFPEMNLESVTPMTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYSEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPGSD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:50)
Show buried residues

Minimal score value
-4.4373
Maximal score value
1.5524
Average score
-1.2541
Total score value
-198.145

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 H A -1.0315
2 H A -0.6255
3 L A 0.6213
4 L A 0.3996
5 A A 0.0000
6 S A -2.3800
7 D A -3.1464
8 E A -4.0873
9 E A -4.4373
10 I A 0.0000
11 Q A -3.5320
12 D A -3.2672
13 V A 0.0000
14 S A -1.1790
15 G A -0.6106
16 T A -0.6163
17 W A -0.5906
18 Y A -0.8743
19 L A 0.0000
20 K A -0.2348
21 A A 0.0000
22 M A 0.7573
23 T A 0.0000
24 V A -0.5776
25 D A -1.7072
26 R A -2.8344
27 E A -2.5313
28 F A -0.6982
29 P A -1.5745
30 E A -1.8743
31 M A -0.7547
32 N A -1.7773
33 L A 0.0000
34 E A -2.2981
35 S A 0.0000
36 V A 0.0000
37 T A 0.0000
38 P A -0.7253
39 M A 0.0000
40 T A -0.6862
41 L A 0.0000
42 T A -0.5661
43 T A -1.1491
44 L A -0.8806
45 E A -2.0638
46 G A -2.3269
47 G A -1.8827
48 N A -1.3914
49 L A 0.0000
50 E A -0.9682
51 A A -0.9265
52 K A -1.7250
53 V A 0.0000
54 T A -1.6248
55 M A 0.0000
56 L A 0.0000
57 I A -1.8040
58 S A -1.6939
59 G A -1.7666
60 R A -2.5136
61 C A -1.6103
62 Q A -2.2312
63 E A -2.6613
64 V A -1.6227
65 K A -2.2297
66 A A -1.0832
67 V A -0.7582
68 L A 0.0000
69 E A -1.8700
70 K A -2.1733
71 T A -2.2057
72 D A -2.7599
73 E A -2.6529
74 P A -1.6301
75 G A 0.0000
76 K A -1.3055
77 Y A 0.0000
78 T A -1.5075
79 A A -1.6555
80 D A -2.4421
81 G A -1.9972
82 G A -1.9991
83 K A -2.3530
84 H A -2.1755
85 V A -1.2712
86 A A -0.5903
87 Y A 0.1285
88 I A 0.0000
89 I A 0.2560
90 R A -1.0610
91 S A 0.0000
92 H A -1.9879
93 V A -1.8040
94 K A -3.0036
95 D A -3.0022
96 H A 0.0000
97 Y A -0.8046
98 I A 0.0000
99 F A 0.0849
100 Y A 0.0000
101 S A -1.1570
102 E A -2.1796
103 G A -2.2799
104 E A -2.5100
105 L A -0.9794
106 H A -1.5641
107 G A -1.8385
108 K A -2.4023
109 P A -2.0907
110 V A -1.6895
111 R A -1.7329
112 G A -0.8330
113 V A 0.0000
114 K A -0.1898
115 L A 0.0000
116 V A 0.0000
117 G A 0.0000
118 R A -3.0326
119 D A -3.4782
120 P A -2.8609
121 K A -3.1218
122 N A -2.3025
123 N A -1.7436
124 L A -0.2880
125 E A -2.1795
126 A A 0.0000
127 L A -1.6485
128 E A -2.9013
129 D A -2.5455
130 F A 0.0000
131 E A -3.2182
132 K A -3.1459
133 A A -1.8476
134 A A 0.0000
135 G A -1.8829
136 A A -1.1585
137 R A -1.2624
138 G A -1.2634
139 L A 0.0000
140 S A -1.1593
141 T A -0.7637
142 E A -1.0799
143 S A -0.4990
144 I A 0.7990
145 L A 1.1123
146 I A 1.5524
147 P A 0.0000
148 R A -1.8904
149 Q A -1.4413
150 S A -1.6397
151 E A -2.1362
152 T A -1.0375
153 C A -1.2579
154 S A -1.0956
155 P A -1.3864
156 G A -1.2840
157 S A -1.4116
158 D A -2.0620
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018